Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8402 | 25429;25430;25431 | chr2:178717670;178717669;178717668 | chr2:179582397;179582396;179582395 |
N2AB | 8085 | 24478;24479;24480 | chr2:178717670;178717669;178717668 | chr2:179582397;179582396;179582395 |
N2A | 7158 | 21697;21698;21699 | chr2:178717670;178717669;178717668 | chr2:179582397;179582396;179582395 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs954211095 | None | 0.861 | N | 0.378 | 0.209 | 0.293502639404 | gnomAD-4.0.0 | 1.59208E-06 | None | None | None | None | I | None | 0 | 2.2877E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | None | None | 0.111 | N | 0.225 | 0.178 | 0.247322355667 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3336 | likely_benign | 0.4035 | ambiguous | -0.261 | Destabilizing | 0.811 | D | 0.391 | neutral | N | 0.463735532 | None | None | I |
D/C | 0.9032 | likely_pathogenic | 0.9312 | pathogenic | 0.148 | Stabilizing | 0.998 | D | 0.471 | neutral | None | None | None | None | I |
D/E | 0.2769 | likely_benign | 0.3224 | benign | -0.303 | Destabilizing | 0.03 | N | 0.243 | neutral | N | 0.463252742 | None | None | I |
D/F | 0.891 | likely_pathogenic | 0.9214 | pathogenic | -0.318 | Destabilizing | 1.0 | D | 0.441 | neutral | None | None | None | None | I |
D/G | 0.2595 | likely_benign | 0.3142 | benign | -0.449 | Destabilizing | 0.861 | D | 0.378 | neutral | N | 0.510027969 | None | None | I |
D/H | 0.6007 | likely_pathogenic | 0.6838 | pathogenic | -0.249 | Destabilizing | 0.995 | D | 0.355 | neutral | D | 0.527074934 | None | None | I |
D/I | 0.7601 | likely_pathogenic | 0.8161 | pathogenic | 0.18 | Stabilizing | 0.999 | D | 0.453 | neutral | None | None | None | None | I |
D/K | 0.6548 | likely_pathogenic | 0.7274 | pathogenic | 0.328 | Stabilizing | 0.99 | D | 0.376 | neutral | None | None | None | None | I |
D/L | 0.7495 | likely_pathogenic | 0.8023 | pathogenic | 0.18 | Stabilizing | 0.999 | D | 0.431 | neutral | None | None | None | None | I |
D/M | 0.8723 | likely_pathogenic | 0.9044 | pathogenic | 0.383 | Stabilizing | 1.0 | D | 0.449 | neutral | None | None | None | None | I |
D/N | 0.1683 | likely_benign | 0.194 | benign | 0.103 | Stabilizing | 0.111 | N | 0.225 | neutral | N | 0.496405311 | None | None | I |
D/P | 0.7054 | likely_pathogenic | 0.7687 | pathogenic | 0.055 | Stabilizing | 0.933 | D | 0.36 | neutral | None | None | None | None | I |
D/Q | 0.6164 | likely_pathogenic | 0.6912 | pathogenic | 0.126 | Stabilizing | 0.992 | D | 0.303 | neutral | None | None | None | None | I |
D/R | 0.6875 | likely_pathogenic | 0.7683 | pathogenic | 0.413 | Stabilizing | 0.997 | D | 0.421 | neutral | None | None | None | None | I |
D/S | 0.2568 | likely_benign | 0.3109 | benign | -0.003 | Destabilizing | 0.311 | N | 0.164 | neutral | None | None | None | None | I |
D/T | 0.4824 | ambiguous | 0.5619 | ambiguous | 0.139 | Stabilizing | 0.86 | D | 0.384 | neutral | None | None | None | None | I |
D/V | 0.5105 | ambiguous | 0.5908 | pathogenic | 0.055 | Stabilizing | 0.989 | D | 0.427 | neutral | D | 0.526554859 | None | None | I |
D/W | 0.9602 | likely_pathogenic | 0.9723 | pathogenic | -0.229 | Destabilizing | 1.0 | D | 0.555 | neutral | None | None | None | None | I |
D/Y | 0.4925 | ambiguous | 0.5709 | pathogenic | -0.094 | Destabilizing | 0.999 | D | 0.442 | neutral | N | 0.489922745 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.