Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8406 | 25441;25442;25443 | chr2:178717658;178717657;178717656 | chr2:179582385;179582384;179582383 |
N2AB | 8089 | 24490;24491;24492 | chr2:178717658;178717657;178717656 | chr2:179582385;179582384;179582383 |
N2A | 7162 | 21709;21710;21711 | chr2:178717658;178717657;178717656 | chr2:179582385;179582384;179582383 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/M | rs1183682062 | -1.009 | 0.01 | N | 0.237 | 0.091 | 0.302793454619 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
L/M | rs1183682062 | -1.009 | 0.01 | N | 0.237 | 0.091 | 0.302793454619 | gnomAD-4.0.0 | 1.5921E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85959E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3971 | ambiguous | 0.3869 | ambiguous | -2.592 | Highly Destabilizing | 0.644 | D | 0.553 | neutral | None | None | None | None | N |
L/C | 0.4821 | ambiguous | 0.5017 | ambiguous | -2.013 | Highly Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | N |
L/D | 0.8743 | likely_pathogenic | 0.8799 | pathogenic | -2.917 | Highly Destabilizing | 0.984 | D | 0.691 | prob.neutral | None | None | None | None | N |
L/E | 0.5445 | ambiguous | 0.5599 | ambiguous | -2.811 | Highly Destabilizing | 0.979 | D | 0.699 | prob.neutral | None | None | None | None | N |
L/F | 0.1444 | likely_benign | 0.1363 | benign | -1.81 | Destabilizing | 0.008 | N | 0.359 | neutral | N | 0.394838381 | None | None | N |
L/G | 0.7201 | likely_pathogenic | 0.7227 | pathogenic | -3.048 | Highly Destabilizing | 0.947 | D | 0.701 | prob.neutral | None | None | None | None | N |
L/H | 0.2728 | likely_benign | 0.2848 | benign | -2.379 | Highly Destabilizing | 0.997 | D | 0.656 | neutral | None | None | None | None | N |
L/I | 0.0717 | likely_benign | 0.068 | benign | -1.32 | Destabilizing | None | N | 0.142 | neutral | None | None | None | None | N |
L/K | 0.3765 | ambiguous | 0.3894 | ambiguous | -2.054 | Highly Destabilizing | 0.474 | N | 0.667 | neutral | None | None | None | None | N |
L/M | 0.1059 | likely_benign | 0.0985 | benign | -1.114 | Destabilizing | 0.01 | N | 0.237 | neutral | N | 0.431319256 | None | None | N |
L/N | 0.56 | ambiguous | 0.5508 | ambiguous | -2.137 | Highly Destabilizing | 0.984 | D | 0.701 | prob.neutral | None | None | None | None | N |
L/P | 0.9423 | likely_pathogenic | 0.9436 | pathogenic | -1.721 | Destabilizing | 0.995 | D | 0.698 | prob.neutral | None | None | None | None | N |
L/Q | 0.2208 | likely_benign | 0.232 | benign | -2.21 | Highly Destabilizing | 0.927 | D | 0.668 | neutral | None | None | None | None | N |
L/R | 0.2492 | likely_benign | 0.2761 | benign | -1.486 | Destabilizing | 0.924 | D | 0.657 | neutral | None | None | None | None | N |
L/S | 0.412 | ambiguous | 0.4061 | ambiguous | -2.78 | Highly Destabilizing | 0.868 | D | 0.623 | neutral | N | 0.472704519 | None | None | N |
L/T | 0.2259 | likely_benign | 0.2184 | benign | -2.544 | Highly Destabilizing | 0.724 | D | 0.6 | neutral | None | None | None | None | N |
L/V | 0.0766 | likely_benign | 0.0772 | benign | -1.721 | Destabilizing | None | N | 0.154 | neutral | N | 0.388045695 | None | None | N |
L/W | 0.276 | likely_benign | 0.2819 | benign | -2.083 | Highly Destabilizing | 0.999 | D | 0.61 | neutral | N | 0.519458316 | None | None | N |
L/Y | 0.3622 | ambiguous | 0.3693 | ambiguous | -1.87 | Destabilizing | 0.417 | N | 0.687 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.