Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8407 | 25444;25445;25446 | chr2:178717655;178717654;178717653 | chr2:179582382;179582381;179582380 |
N2AB | 8090 | 24493;24494;24495 | chr2:178717655;178717654;178717653 | chr2:179582382;179582381;179582380 |
N2A | 7163 | 21712;21713;21714 | chr2:178717655;178717654;178717653 | chr2:179582382;179582381;179582380 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs1381783502 | None | 0.997 | N | 0.426 | 0.303 | 0.199424873507 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Q/H | rs1381783502 | None | 0.997 | N | 0.426 | 0.303 | 0.199424873507 | gnomAD-4.0.0 | 3.84524E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.18233E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.4413 | ambiguous | 0.4651 | ambiguous | -0.449 | Destabilizing | 0.843 | D | 0.333 | neutral | None | None | None | None | I |
Q/C | 0.8116 | likely_pathogenic | 0.841 | pathogenic | -0.116 | Destabilizing | 0.999 | D | 0.505 | neutral | None | None | None | None | I |
Q/D | 0.6512 | likely_pathogenic | 0.6922 | pathogenic | -1.312 | Destabilizing | 0.787 | D | 0.285 | neutral | None | None | None | None | I |
Q/E | 0.1323 | likely_benign | 0.1355 | benign | -1.212 | Destabilizing | 0.095 | N | 0.134 | neutral | N | 0.493077004 | None | None | I |
Q/F | 0.7827 | likely_pathogenic | 0.8203 | pathogenic | -0.365 | Destabilizing | 0.996 | D | 0.517 | neutral | None | None | None | None | I |
Q/G | 0.5419 | ambiguous | 0.5869 | pathogenic | -0.794 | Destabilizing | 0.961 | D | 0.423 | neutral | None | None | None | None | I |
Q/H | 0.272 | likely_benign | 0.3057 | benign | -0.911 | Destabilizing | 0.997 | D | 0.426 | neutral | N | 0.516724655 | None | None | I |
Q/I | 0.5249 | ambiguous | 0.5554 | ambiguous | 0.423 | Stabilizing | 0.922 | D | 0.5 | neutral | None | None | None | None | I |
Q/K | 0.1133 | likely_benign | 0.1238 | benign | -0.311 | Destabilizing | 0.881 | D | 0.351 | neutral | N | 0.483244012 | None | None | I |
Q/L | 0.2265 | likely_benign | 0.2541 | benign | 0.423 | Stabilizing | 0.787 | D | 0.419 | neutral | N | 0.51620458 | None | None | I |
Q/M | 0.5244 | ambiguous | 0.544 | ambiguous | 0.916 | Stabilizing | 0.994 | D | 0.412 | neutral | None | None | None | None | I |
Q/N | 0.4965 | ambiguous | 0.5269 | ambiguous | -0.971 | Destabilizing | 0.947 | D | 0.285 | neutral | None | None | None | None | I |
Q/P | 0.7131 | likely_pathogenic | 0.7768 | pathogenic | 0.164 | Stabilizing | 0.965 | D | 0.501 | neutral | N | 0.508471527 | None | None | I |
Q/R | 0.1224 | likely_benign | 0.1394 | benign | -0.287 | Destabilizing | 0.922 | D | 0.3 | neutral | N | 0.487785827 | None | None | I |
Q/S | 0.464 | ambiguous | 0.4973 | ambiguous | -0.973 | Destabilizing | 0.494 | N | 0.115 | neutral | None | None | None | None | I |
Q/T | 0.3679 | ambiguous | 0.3889 | ambiguous | -0.689 | Destabilizing | 0.013 | N | 0.215 | neutral | None | None | None | None | I |
Q/V | 0.3782 | ambiguous | 0.4032 | ambiguous | 0.164 | Stabilizing | 0.087 | N | 0.336 | neutral | None | None | None | None | I |
Q/W | 0.6827 | likely_pathogenic | 0.7345 | pathogenic | -0.348 | Destabilizing | 1.0 | D | 0.513 | neutral | None | None | None | None | I |
Q/Y | 0.5823 | likely_pathogenic | 0.6337 | pathogenic | -0.013 | Destabilizing | 0.999 | D | 0.481 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.