Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8414 | 25465;25466;25467 | chr2:178717634;178717633;178717632 | chr2:179582361;179582360;179582359 |
N2AB | 8097 | 24514;24515;24516 | chr2:178717634;178717633;178717632 | chr2:179582361;179582360;179582359 |
N2A | 7170 | 21733;21734;21735 | chr2:178717634;178717633;178717632 | chr2:179582361;179582360;179582359 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs759822411 | -1.805 | 0.961 | N | 0.533 | 0.245 | 0.675459934904 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
V/A | rs759822411 | -1.805 | 0.961 | N | 0.533 | 0.245 | 0.675459934904 | gnomAD-4.0.0 | 1.36884E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9964E-07 | 1.16042E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2394 | likely_benign | 0.2839 | benign | -1.797 | Destabilizing | 0.961 | D | 0.533 | neutral | N | 0.488299676 | None | None | N |
V/C | 0.8685 | likely_pathogenic | 0.8937 | pathogenic | -1.318 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | N |
V/D | 0.4878 | ambiguous | 0.6167 | pathogenic | -2.101 | Highly Destabilizing | 0.377 | N | 0.522 | neutral | None | None | None | None | N |
V/E | 0.3518 | ambiguous | 0.4512 | ambiguous | -2.047 | Highly Destabilizing | 0.922 | D | 0.655 | neutral | N | 0.515220358 | None | None | N |
V/F | 0.2328 | likely_benign | 0.2874 | benign | -1.299 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
V/G | 0.4161 | ambiguous | 0.5261 | ambiguous | -2.17 | Highly Destabilizing | 0.995 | D | 0.699 | prob.neutral | N | 0.493519721 | None | None | N |
V/H | 0.6112 | likely_pathogenic | 0.7169 | pathogenic | -1.749 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
V/I | 0.0731 | likely_benign | 0.0796 | benign | -0.835 | Destabilizing | 0.902 | D | 0.539 | neutral | N | 0.480993141 | None | None | N |
V/K | 0.3995 | ambiguous | 0.4999 | ambiguous | -1.452 | Destabilizing | 0.996 | D | 0.679 | prob.neutral | None | None | None | None | N |
V/L | 0.2901 | likely_benign | 0.3473 | ambiguous | -0.835 | Destabilizing | 0.792 | D | 0.537 | neutral | N | 0.503581999 | None | None | N |
V/M | 0.1463 | likely_benign | 0.1753 | benign | -0.711 | Destabilizing | 1.0 | D | 0.587 | neutral | None | None | None | None | N |
V/N | 0.3619 | ambiguous | 0.4795 | ambiguous | -1.384 | Destabilizing | 0.973 | D | 0.752 | deleterious | None | None | None | None | N |
V/P | 0.9785 | likely_pathogenic | 0.9853 | pathogenic | -1.124 | Destabilizing | 0.995 | D | 0.738 | prob.delet. | None | None | None | None | N |
V/Q | 0.3933 | ambiguous | 0.4791 | ambiguous | -1.512 | Destabilizing | 0.997 | D | 0.746 | deleterious | None | None | None | None | N |
V/R | 0.3657 | ambiguous | 0.4572 | ambiguous | -0.986 | Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | N |
V/S | 0.2886 | likely_benign | 0.3839 | ambiguous | -1.92 | Destabilizing | 0.975 | D | 0.655 | neutral | None | None | None | None | N |
V/T | 0.1619 | likely_benign | 0.192 | benign | -1.758 | Destabilizing | 0.299 | N | 0.385 | neutral | None | None | None | None | N |
V/W | 0.8634 | likely_pathogenic | 0.9111 | pathogenic | -1.594 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
V/Y | 0.6167 | likely_pathogenic | 0.697 | pathogenic | -1.289 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.