Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8416 | 25471;25472;25473 | chr2:178717628;178717627;178717626 | chr2:179582355;179582354;179582353 |
N2AB | 8099 | 24520;24521;24522 | chr2:178717628;178717627;178717626 | chr2:179582355;179582354;179582353 |
N2A | 7172 | 21739;21740;21741 | chr2:178717628;178717627;178717626 | chr2:179582355;179582354;179582353 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs794729631 | 0.258 | 0.225 | D | 0.366 | 0.393 | 0.464270400615 | gnomAD-2.1.1 | 1.08E-05 | None | None | None | None | N | None | 8.29E-05 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
T/I | rs794729631 | 0.258 | 0.225 | D | 0.366 | 0.393 | 0.464270400615 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs794729631 | 0.258 | 0.225 | D | 0.366 | 0.393 | 0.464270400615 | gnomAD-4.0.0 | 5.12746E-06 | None | None | None | None | N | None | 5.0758E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.34174E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0928 | likely_benign | 0.1077 | benign | -1.052 | Destabilizing | 0.426 | N | 0.449 | neutral | N | 0.488889696 | None | None | N |
T/C | 0.4694 | ambiguous | 0.5131 | ambiguous | -0.799 | Destabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | N |
T/D | 0.5951 | likely_pathogenic | 0.704 | pathogenic | -1.653 | Destabilizing | 0.936 | D | 0.582 | neutral | None | None | None | None | N |
T/E | 0.4227 | ambiguous | 0.5336 | ambiguous | -1.48 | Destabilizing | 0.98 | D | 0.578 | neutral | None | None | None | None | N |
T/F | 0.208 | likely_benign | 0.2815 | benign | -0.771 | Destabilizing | 0.999 | D | 0.632 | neutral | None | None | None | None | N |
T/G | 0.3455 | ambiguous | 0.4247 | ambiguous | -1.448 | Destabilizing | 0.992 | D | 0.589 | neutral | None | None | None | None | N |
T/H | 0.2263 | likely_benign | 0.2848 | benign | -1.685 | Destabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | N |
T/I | 0.1418 | likely_benign | 0.1741 | benign | -0.026 | Destabilizing | 0.225 | N | 0.366 | neutral | D | 0.531678251 | None | None | N |
T/K | 0.2101 | likely_benign | 0.2714 | benign | -0.618 | Destabilizing | 0.986 | D | 0.576 | neutral | None | None | None | None | N |
T/L | 0.103 | likely_benign | 0.1252 | benign | -0.026 | Destabilizing | 0.934 | D | 0.506 | neutral | None | None | None | None | N |
T/M | 0.0908 | likely_benign | 0.1032 | benign | 0.009 | Stabilizing | 0.998 | D | 0.621 | neutral | None | None | None | None | N |
T/N | 0.1677 | likely_benign | 0.2146 | benign | -1.257 | Destabilizing | 0.975 | D | 0.571 | neutral | N | 0.489650165 | None | None | N |
T/P | 0.7553 | likely_pathogenic | 0.8301 | pathogenic | -0.336 | Destabilizing | 0.987 | D | 0.615 | neutral | D | 0.540608795 | None | None | N |
T/Q | 0.2342 | likely_benign | 0.2936 | benign | -1.086 | Destabilizing | 0.996 | D | 0.613 | neutral | None | None | None | None | N |
T/R | 0.1552 | likely_benign | 0.21 | benign | -0.786 | Destabilizing | 0.999 | D | 0.618 | neutral | None | None | None | None | N |
T/S | 0.1134 | likely_benign | 0.1395 | benign | -1.401 | Destabilizing | 0.123 | N | 0.345 | neutral | N | 0.484286949 | None | None | N |
T/V | 0.1196 | likely_benign | 0.1346 | benign | -0.336 | Destabilizing | 0.396 | N | 0.294 | neutral | None | None | None | None | N |
T/W | 0.5847 | likely_pathogenic | 0.6978 | pathogenic | -0.966 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
T/Y | 0.2542 | likely_benign | 0.3295 | benign | -0.574 | Destabilizing | 1.0 | D | 0.629 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.