Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8420 | 25483;25484;25485 | chr2:178717616;178717615;178717614 | chr2:179582343;179582342;179582341 |
N2AB | 8103 | 24532;24533;24534 | chr2:178717616;178717615;178717614 | chr2:179582343;179582342;179582341 |
N2A | 7176 | 21751;21752;21753 | chr2:178717616;178717615;178717614 | chr2:179582343;179582342;179582341 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.918 | N | 0.38 | 0.196 | 0.764019764511 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2374 | likely_benign | 0.2508 | benign | -1.252 | Destabilizing | 0.924 | D | 0.337 | neutral | None | None | None | None | N |
L/C | 0.5913 | likely_pathogenic | 0.5559 | ambiguous | -0.661 | Destabilizing | 1.0 | D | 0.386 | neutral | None | None | None | None | N |
L/D | 0.6524 | likely_pathogenic | 0.6702 | pathogenic | -0.793 | Destabilizing | 0.937 | D | 0.431 | neutral | None | None | None | None | N |
L/E | 0.3241 | likely_benign | 0.3346 | benign | -0.866 | Destabilizing | 0.226 | N | 0.297 | neutral | None | None | None | None | N |
L/F | 0.1119 | likely_benign | 0.1156 | benign | -1.068 | Destabilizing | 0.984 | D | 0.353 | neutral | D | 0.525997499 | None | None | N |
L/G | 0.4598 | ambiguous | 0.4692 | ambiguous | -1.487 | Destabilizing | 0.984 | D | 0.424 | neutral | None | None | None | None | N |
L/H | 0.1793 | likely_benign | 0.1787 | benign | -0.697 | Destabilizing | 0.082 | N | 0.387 | neutral | None | None | None | None | N |
L/I | 0.0979 | likely_benign | 0.0998 | benign | -0.721 | Destabilizing | 0.396 | N | 0.251 | neutral | D | 0.53273147 | None | None | N |
L/K | 0.2061 | likely_benign | 0.2072 | benign | -0.748 | Destabilizing | 0.303 | N | 0.369 | neutral | None | None | None | None | N |
L/M | 0.1183 | likely_benign | 0.1194 | benign | -0.456 | Destabilizing | 0.987 | D | 0.387 | neutral | None | None | None | None | N |
L/N | 0.3461 | ambiguous | 0.357 | ambiguous | -0.442 | Destabilizing | 0.967 | D | 0.437 | neutral | None | None | None | None | N |
L/P | 0.4021 | ambiguous | 0.3965 | ambiguous | -0.866 | Destabilizing | 0.085 | N | 0.348 | neutral | None | None | None | None | N |
L/Q | 0.114 | likely_benign | 0.1158 | benign | -0.735 | Destabilizing | 0.323 | N | 0.312 | neutral | None | None | None | None | N |
L/R | 0.1359 | likely_benign | 0.1324 | benign | -0.069 | Destabilizing | 0.922 | D | 0.409 | neutral | None | None | None | None | N |
L/S | 0.2084 | likely_benign | 0.2216 | benign | -0.958 | Destabilizing | 0.918 | D | 0.38 | neutral | N | 0.498077392 | None | None | N |
L/T | 0.1994 | likely_benign | 0.2052 | benign | -0.928 | Destabilizing | 0.106 | N | 0.179 | neutral | None | None | None | None | N |
L/V | 0.108 | likely_benign | 0.1087 | benign | -0.866 | Destabilizing | 0.263 | N | 0.255 | neutral | D | 0.527440294 | None | None | N |
L/W | 0.1961 | likely_benign | 0.1859 | benign | -1.057 | Destabilizing | 1.0 | D | 0.432 | neutral | None | None | None | None | N |
L/Y | 0.2924 | likely_benign | 0.2951 | benign | -0.845 | Destabilizing | 0.828 | D | 0.398 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.