Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8460 | 25603;25604;25605 | chr2:178717356;178717355;178717354 | chr2:179582083;179582082;179582081 |
N2AB | 8143 | 24652;24653;24654 | chr2:178717356;178717355;178717354 | chr2:179582083;179582082;179582081 |
N2A | 7216 | 21871;21872;21873 | chr2:178717356;178717355;178717354 | chr2:179582083;179582082;179582081 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/Q | None | None | 0.021 | N | 0.249 | 0.141 | 0.598822425987 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2071 | likely_benign | 0.1932 | benign | -1.707 | Destabilizing | 0.269 | N | 0.341 | neutral | None | None | None | None | I |
L/C | 0.4983 | ambiguous | 0.4626 | ambiguous | -0.614 | Destabilizing | 0.979 | D | 0.371 | neutral | None | None | None | None | I |
L/D | 0.551 | ambiguous | 0.5012 | ambiguous | -1.525 | Destabilizing | 0.862 | D | 0.4 | neutral | None | None | None | None | I |
L/E | 0.1939 | likely_benign | 0.1769 | benign | -1.545 | Destabilizing | 0.397 | N | 0.415 | neutral | None | None | None | None | I |
L/F | 0.1333 | likely_benign | 0.1335 | benign | -1.318 | Destabilizing | 0.713 | D | 0.332 | neutral | None | None | None | None | I |
L/G | 0.5285 | ambiguous | 0.4872 | ambiguous | -2.007 | Highly Destabilizing | 0.783 | D | 0.421 | neutral | None | None | None | None | I |
L/H | 0.1603 | likely_benign | 0.1513 | benign | -1.329 | Destabilizing | 0.84 | D | 0.36 | neutral | None | None | None | None | I |
L/I | 0.0646 | likely_benign | 0.0658 | benign | -0.95 | Destabilizing | None | N | 0.121 | neutral | N | 0.442821542 | None | None | I |
L/K | 0.1727 | likely_benign | 0.1563 | benign | -1.196 | Destabilizing | 0.026 | N | 0.383 | neutral | None | None | None | None | I |
L/M | 0.0906 | likely_benign | 0.0885 | benign | -0.485 | Destabilizing | 0.427 | N | 0.384 | neutral | None | None | None | None | I |
L/N | 0.3102 | likely_benign | 0.2875 | benign | -0.863 | Destabilizing | 0.927 | D | 0.394 | neutral | None | None | None | None | I |
L/P | 0.8981 | likely_pathogenic | 0.8547 | pathogenic | -1.174 | Destabilizing | 0.967 | D | 0.393 | neutral | N | 0.499253615 | None | None | I |
L/Q | 0.0889 | likely_benign | 0.0867 | benign | -1.093 | Destabilizing | 0.021 | N | 0.249 | neutral | N | 0.45620934 | None | None | I |
L/R | 0.128 | likely_benign | 0.1196 | benign | -0.519 | Destabilizing | 0.002 | N | 0.249 | neutral | N | 0.440858672 | None | None | I |
L/S | 0.2118 | likely_benign | 0.2014 | benign | -1.339 | Destabilizing | 0.64 | D | 0.385 | neutral | None | None | None | None | I |
L/T | 0.1539 | likely_benign | 0.1513 | benign | -1.261 | Destabilizing | 0.348 | N | 0.374 | neutral | None | None | None | None | I |
L/V | 0.0675 | likely_benign | 0.064 | benign | -1.174 | Destabilizing | None | N | 0.099 | neutral | N | 0.439839952 | None | None | I |
L/W | 0.2355 | likely_benign | 0.2353 | benign | -1.433 | Destabilizing | 0.995 | D | 0.373 | neutral | None | None | None | None | I |
L/Y | 0.3037 | likely_benign | 0.2967 | benign | -1.244 | Destabilizing | 0.371 | N | 0.397 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.