Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC846025603;25604;25605 chr2:178717356;178717355;178717354chr2:179582083;179582082;179582081
N2AB814324652;24653;24654 chr2:178717356;178717355;178717354chr2:179582083;179582082;179582081
N2A721621871;21872;21873 chr2:178717356;178717355;178717354chr2:179582083;179582082;179582081
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTA
  • RefSeq wild type template codon: GAT
  • Domain: Ig-70
  • Domain position: 5
  • Structural Position: 5
  • Q(SASA): 0.6587
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/Q None None 0.021 N 0.249 0.141 0.598822425987 gnomAD-4.0.0 1.20032E-06 None None None None I None 0 0 None 0 0 None 0 0 1.3125E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2071 likely_benign 0.1932 benign -1.707 Destabilizing 0.269 N 0.341 neutral None None None None I
L/C 0.4983 ambiguous 0.4626 ambiguous -0.614 Destabilizing 0.979 D 0.371 neutral None None None None I
L/D 0.551 ambiguous 0.5012 ambiguous -1.525 Destabilizing 0.862 D 0.4 neutral None None None None I
L/E 0.1939 likely_benign 0.1769 benign -1.545 Destabilizing 0.397 N 0.415 neutral None None None None I
L/F 0.1333 likely_benign 0.1335 benign -1.318 Destabilizing 0.713 D 0.332 neutral None None None None I
L/G 0.5285 ambiguous 0.4872 ambiguous -2.007 Highly Destabilizing 0.783 D 0.421 neutral None None None None I
L/H 0.1603 likely_benign 0.1513 benign -1.329 Destabilizing 0.84 D 0.36 neutral None None None None I
L/I 0.0646 likely_benign 0.0658 benign -0.95 Destabilizing None N 0.121 neutral N 0.442821542 None None I
L/K 0.1727 likely_benign 0.1563 benign -1.196 Destabilizing 0.026 N 0.383 neutral None None None None I
L/M 0.0906 likely_benign 0.0885 benign -0.485 Destabilizing 0.427 N 0.384 neutral None None None None I
L/N 0.3102 likely_benign 0.2875 benign -0.863 Destabilizing 0.927 D 0.394 neutral None None None None I
L/P 0.8981 likely_pathogenic 0.8547 pathogenic -1.174 Destabilizing 0.967 D 0.393 neutral N 0.499253615 None None I
L/Q 0.0889 likely_benign 0.0867 benign -1.093 Destabilizing 0.021 N 0.249 neutral N 0.45620934 None None I
L/R 0.128 likely_benign 0.1196 benign -0.519 Destabilizing 0.002 N 0.249 neutral N 0.440858672 None None I
L/S 0.2118 likely_benign 0.2014 benign -1.339 Destabilizing 0.64 D 0.385 neutral None None None None I
L/T 0.1539 likely_benign 0.1513 benign -1.261 Destabilizing 0.348 N 0.374 neutral None None None None I
L/V 0.0675 likely_benign 0.064 benign -1.174 Destabilizing None N 0.099 neutral N 0.439839952 None None I
L/W 0.2355 likely_benign 0.2353 benign -1.433 Destabilizing 0.995 D 0.373 neutral None None None None I
L/Y 0.3037 likely_benign 0.2967 benign -1.244 Destabilizing 0.371 N 0.397 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.