Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8483 | 25672;25673;25674 | chr2:178717287;178717286;178717285 | chr2:179582014;179582013;179582012 |
N2AB | 8166 | 24721;24722;24723 | chr2:178717287;178717286;178717285 | chr2:179582014;179582013;179582012 |
N2A | 7239 | 21940;21941;21942 | chr2:178717287;178717286;178717285 | chr2:179582014;179582013;179582012 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1156463241 | -0.564 | 0.001 | N | 0.25 | 0.268 | 0.158396225186 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
A/T | rs1156463241 | -0.564 | 0.001 | N | 0.25 | 0.268 | 0.158396225186 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/T | rs1156463241 | -0.564 | 0.001 | N | 0.25 | 0.268 | 0.158396225186 | gnomAD-4.0.0 | 3.09871E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.23837E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6361 | likely_pathogenic | 0.5379 | ambiguous | -0.905 | Destabilizing | 0.983 | D | 0.575 | neutral | None | None | None | None | I |
A/D | 0.1995 | likely_benign | 0.1855 | benign | -0.519 | Destabilizing | 0.002 | N | 0.252 | neutral | None | None | None | None | I |
A/E | 0.142 | likely_benign | 0.1379 | benign | -0.655 | Destabilizing | 0.272 | N | 0.501 | neutral | N | 0.46941071 | None | None | I |
A/F | 0.277 | likely_benign | 0.2414 | benign | -0.853 | Destabilizing | 0.903 | D | 0.617 | neutral | None | None | None | None | I |
A/G | 0.1439 | likely_benign | 0.1302 | benign | -0.318 | Destabilizing | 0.021 | N | 0.444 | neutral | N | 0.517721945 | None | None | I |
A/H | 0.3825 | ambiguous | 0.3227 | benign | -0.228 | Destabilizing | 0.95 | D | 0.617 | neutral | None | None | None | None | I |
A/I | 0.2005 | likely_benign | 0.1629 | benign | -0.376 | Destabilizing | 0.57 | D | 0.567 | neutral | None | None | None | None | I |
A/K | 0.2778 | likely_benign | 0.2344 | benign | -0.67 | Destabilizing | 0.57 | D | 0.573 | neutral | None | None | None | None | I |
A/L | 0.131 | likely_benign | 0.1169 | benign | -0.376 | Destabilizing | 0.158 | N | 0.459 | neutral | None | None | None | None | I |
A/M | 0.1833 | likely_benign | 0.1614 | benign | -0.625 | Destabilizing | 0.354 | N | 0.371 | neutral | None | None | None | None | I |
A/N | 0.2072 | likely_benign | 0.1787 | benign | -0.403 | Destabilizing | 0.077 | N | 0.641 | neutral | None | None | None | None | I |
A/P | 0.1346 | likely_benign | 0.1294 | benign | -0.316 | Destabilizing | 0.001 | N | 0.194 | neutral | N | 0.323119064 | None | None | I |
A/Q | 0.2066 | likely_benign | 0.1859 | benign | -0.638 | Destabilizing | 0.076 | N | 0.257 | neutral | None | None | None | None | I |
A/R | 0.2809 | likely_benign | 0.2389 | benign | -0.226 | Destabilizing | 0.823 | D | 0.649 | neutral | None | None | None | None | I |
A/S | 0.0783 | likely_benign | 0.0771 | benign | -0.604 | Destabilizing | 0.008 | N | 0.46 | neutral | N | 0.485996316 | None | None | I |
A/T | 0.08 | likely_benign | 0.0735 | benign | -0.659 | Destabilizing | 0.001 | N | 0.25 | neutral | N | 0.492885003 | None | None | I |
A/V | 0.1026 | likely_benign | 0.0894 | benign | -0.316 | Destabilizing | 0.01 | N | 0.23 | neutral | N | 0.490403271 | None | None | I |
A/W | 0.6641 | likely_pathogenic | 0.6059 | pathogenic | -0.972 | Destabilizing | 0.995 | D | 0.648 | neutral | None | None | None | None | I |
A/Y | 0.3916 | ambiguous | 0.3377 | benign | -0.653 | Destabilizing | 0.95 | D | 0.618 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.