Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8485 | 25678;25679;25680 | chr2:178717281;178717280;178717279 | chr2:179582008;179582007;179582006 |
N2AB | 8168 | 24727;24728;24729 | chr2:178717281;178717280;178717279 | chr2:179582008;179582007;179582006 |
N2A | 7241 | 21946;21947;21948 | chr2:178717281;178717280;178717279 | chr2:179582008;179582007;179582006 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | None | None | None | N | 0.097 | 0.229 | 0.344945010812 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/V | rs1560628327 | None | 0.006 | N | 0.312 | 0.163 | 0.47282010386 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/V | rs1560628327 | None | 0.006 | N | 0.312 | 0.163 | 0.47282010386 | gnomAD-4.0.0 | 1.3194E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.5664E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7847 | likely_pathogenic | 0.7109 | pathogenic | -1.802 | Destabilizing | 0.333 | N | 0.427 | neutral | None | None | None | None | I |
I/C | 0.9296 | likely_pathogenic | 0.8914 | pathogenic | -1.124 | Destabilizing | 0.995 | D | 0.558 | neutral | None | None | None | None | I |
I/D | 0.9883 | likely_pathogenic | 0.9789 | pathogenic | -1.248 | Destabilizing | 0.945 | D | 0.655 | neutral | None | None | None | None | I |
I/E | 0.9622 | likely_pathogenic | 0.9372 | pathogenic | -1.248 | Destabilizing | 0.927 | D | 0.665 | neutral | None | None | None | None | I |
I/F | 0.3487 | ambiguous | 0.2819 | benign | -1.346 | Destabilizing | 0.002 | N | 0.269 | neutral | N | 0.50023505 | None | None | I |
I/G | 0.9536 | likely_pathogenic | 0.9228 | pathogenic | -2.134 | Highly Destabilizing | 0.707 | D | 0.647 | neutral | None | None | None | None | I |
I/H | 0.9441 | likely_pathogenic | 0.9043 | pathogenic | -1.413 | Destabilizing | 0.988 | D | 0.635 | neutral | None | None | None | None | I |
I/K | 0.9016 | likely_pathogenic | 0.8427 | pathogenic | -1.236 | Destabilizing | 0.199 | N | 0.65 | neutral | None | None | None | None | I |
I/L | 0.134 | likely_benign | 0.0999 | benign | -0.957 | Destabilizing | None | N | 0.097 | neutral | N | 0.446917853 | None | None | I |
I/M | 0.1201 | likely_benign | 0.1029 | benign | -0.712 | Destabilizing | 0.003 | N | 0.208 | neutral | D | 0.52366927 | None | None | I |
I/N | 0.8813 | likely_pathogenic | 0.8279 | pathogenic | -0.996 | Destabilizing | 0.928 | D | 0.653 | neutral | N | 0.513129108 | None | None | I |
I/P | 0.8998 | likely_pathogenic | 0.8717 | pathogenic | -1.208 | Destabilizing | 0.981 | D | 0.653 | neutral | None | None | None | None | I |
I/Q | 0.8888 | likely_pathogenic | 0.8314 | pathogenic | -1.189 | Destabilizing | 0.778 | D | 0.653 | neutral | None | None | None | None | I |
I/R | 0.8539 | likely_pathogenic | 0.7719 | pathogenic | -0.656 | Destabilizing | 0.771 | D | 0.655 | neutral | None | None | None | None | I |
I/S | 0.847 | likely_pathogenic | 0.7864 | pathogenic | -1.625 | Destabilizing | 0.646 | D | 0.571 | neutral | D | 0.52366927 | None | None | I |
I/T | 0.8247 | likely_pathogenic | 0.7557 | pathogenic | -1.507 | Destabilizing | 0.354 | N | 0.498 | neutral | N | 0.486124083 | None | None | I |
I/V | 0.0996 | likely_benign | 0.0938 | benign | -1.208 | Destabilizing | 0.006 | N | 0.312 | neutral | N | 0.508699817 | None | None | I |
I/W | 0.9321 | likely_pathogenic | 0.8816 | pathogenic | -1.405 | Destabilizing | 0.997 | D | 0.629 | neutral | None | None | None | None | I |
I/Y | 0.8329 | likely_pathogenic | 0.7485 | pathogenic | -1.194 | Destabilizing | 0.165 | N | 0.557 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.