Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8487 | 25684;25685;25686 | chr2:178717275;178717274;178717273 | chr2:179582002;179582001;179582000 |
N2AB | 8170 | 24733;24734;24735 | chr2:178717275;178717274;178717273 | chr2:179582002;179582001;179582000 |
N2A | 7243 | 21952;21953;21954 | chr2:178717275;178717274;178717273 | chr2:179582002;179582001;179582000 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1368912492 | None | None | N | 0.255 | 0.22 | 0.366085729538 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.877 | likely_pathogenic | 0.826 | pathogenic | -1.797 | Destabilizing | 0.851 | D | 0.705 | prob.neutral | None | None | None | None | N |
I/C | 0.9316 | likely_pathogenic | 0.9049 | pathogenic | -1.043 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
I/D | 0.9928 | likely_pathogenic | 0.9905 | pathogenic | -1.38 | Destabilizing | 0.998 | D | 0.851 | deleterious | None | None | None | None | N |
I/E | 0.9824 | likely_pathogenic | 0.9781 | pathogenic | -1.317 | Destabilizing | 0.993 | D | 0.827 | deleterious | None | None | None | None | N |
I/F | 0.3876 | ambiguous | 0.3952 | ambiguous | -1.102 | Destabilizing | 0.967 | D | 0.695 | prob.neutral | N | 0.499021915 | None | None | N |
I/G | 0.9733 | likely_pathogenic | 0.9566 | pathogenic | -2.183 | Highly Destabilizing | 0.995 | D | 0.807 | deleterious | None | None | None | None | N |
I/H | 0.9731 | likely_pathogenic | 0.9688 | pathogenic | -1.389 | Destabilizing | 0.999 | D | 0.834 | deleterious | None | None | None | None | N |
I/K | 0.9633 | likely_pathogenic | 0.9546 | pathogenic | -1.347 | Destabilizing | 0.853 | D | 0.832 | deleterious | None | None | None | None | N |
I/L | 0.2744 | likely_benign | 0.2359 | benign | -0.777 | Destabilizing | 0.053 | N | 0.434 | neutral | N | 0.492069701 | None | None | N |
I/M | 0.2027 | likely_benign | 0.1731 | benign | -0.614 | Destabilizing | 0.898 | D | 0.689 | prob.neutral | N | 0.515342198 | None | None | N |
I/N | 0.9058 | likely_pathogenic | 0.8829 | pathogenic | -1.234 | Destabilizing | 0.998 | D | 0.85 | deleterious | D | 0.552057687 | None | None | N |
I/P | 0.9751 | likely_pathogenic | 0.9664 | pathogenic | -1.088 | Destabilizing | 0.998 | D | 0.853 | deleterious | None | None | None | None | N |
I/Q | 0.9654 | likely_pathogenic | 0.9588 | pathogenic | -1.322 | Destabilizing | 0.996 | D | 0.843 | deleterious | None | None | None | None | N |
I/R | 0.9509 | likely_pathogenic | 0.9401 | pathogenic | -0.815 | Destabilizing | 0.987 | D | 0.849 | deleterious | None | None | None | None | N |
I/S | 0.9106 | likely_pathogenic | 0.8786 | pathogenic | -1.859 | Destabilizing | 0.987 | D | 0.812 | deleterious | D | 0.540447892 | None | None | N |
I/T | 0.8257 | likely_pathogenic | 0.7898 | pathogenic | -1.67 | Destabilizing | 0.863 | D | 0.711 | prob.delet. | N | 0.519456801 | None | None | N |
I/V | 0.1049 | likely_benign | 0.0996 | benign | -1.088 | Destabilizing | None | N | 0.255 | neutral | N | 0.411895628 | None | None | N |
I/W | 0.966 | likely_pathogenic | 0.9601 | pathogenic | -1.252 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
I/Y | 0.8535 | likely_pathogenic | 0.8461 | pathogenic | -1.021 | Destabilizing | 0.902 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.