Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8492 | 25699;25700;25701 | chr2:178717260;178717259;178717258 | chr2:179581987;179581986;179581985 |
N2AB | 8175 | 24748;24749;24750 | chr2:178717260;178717259;178717258 | chr2:179581987;179581986;179581985 |
N2A | 7248 | 21967;21968;21969 | chr2:178717260;178717259;178717258 | chr2:179581987;179581986;179581985 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | None | None | 0.997 | N | 0.642 | 0.453 | 0.341226946553 | gnomAD-4.0.0 | 6.84268E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99541E-07 | 0 | 0 |
D/E | rs777349143 | -0.113 | 0.12 | N | 0.338 | 0.098 | 0.0611884634855 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
D/E | rs777349143 | -0.113 | 0.12 | N | 0.338 | 0.098 | 0.0611884634855 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06868E-04 | 0 |
D/E | rs777349143 | -0.113 | 0.12 | N | 0.338 | 0.098 | 0.0611884634855 | gnomAD-4.0.0 | 5.57758E-06 | None | None | None | None | N | None | 1.33494E-05 | 0 | None | 0 | 0 | None | 0 | 1.64474E-04 | 4.23838E-06 | 2.19578E-05 | 0 |
D/G | None | None | 0.993 | N | 0.673 | 0.457 | 0.267755039894 | gnomAD-4.0.0 | 6.84268E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99541E-07 | 0 | 0 |
D/N | rs770655555 | 0.39 | 0.997 | N | 0.651 | 0.272 | 0.284150004643 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.87E-06 | 0 |
D/N | rs770655555 | 0.39 | 0.997 | N | 0.651 | 0.272 | 0.284150004643 | gnomAD-4.0.0 | 1.36854E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99543E-07 | 0 | 1.65689E-05 |
D/Y | rs770655555 | None | 1.0 | N | 0.7 | 0.412 | 0.508223314113 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/Y | rs770655555 | None | 1.0 | N | 0.7 | 0.412 | 0.508223314113 | gnomAD-4.0.0 | 6.57073E-06 | None | None | None | None | N | None | 2.41173E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.6019 | likely_pathogenic | 0.5005 | ambiguous | -0.699 | Destabilizing | 0.997 | D | 0.642 | neutral | N | 0.459066838 | None | None | N |
D/C | 0.9525 | likely_pathogenic | 0.9149 | pathogenic | -0.241 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
D/E | 0.3185 | likely_benign | 0.2413 | benign | -0.641 | Destabilizing | 0.12 | N | 0.338 | neutral | N | 0.502946415 | None | None | N |
D/F | 0.9277 | likely_pathogenic | 0.9004 | pathogenic | -0.414 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
D/G | 0.3345 | likely_benign | 0.2674 | benign | -0.991 | Destabilizing | 0.993 | D | 0.673 | neutral | N | 0.462999949 | None | None | N |
D/H | 0.8427 | likely_pathogenic | 0.7625 | pathogenic | -0.595 | Destabilizing | 1.0 | D | 0.67 | neutral | N | 0.510265731 | None | None | N |
D/I | 0.9237 | likely_pathogenic | 0.8766 | pathogenic | 0.058 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
D/K | 0.9161 | likely_pathogenic | 0.8559 | pathogenic | -0.304 | Destabilizing | 0.999 | D | 0.668 | neutral | None | None | None | None | N |
D/L | 0.8611 | likely_pathogenic | 0.8127 | pathogenic | 0.058 | Stabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
D/M | 0.9481 | likely_pathogenic | 0.9166 | pathogenic | 0.46 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
D/N | 0.2325 | likely_benign | 0.1946 | benign | -0.691 | Destabilizing | 0.997 | D | 0.651 | neutral | N | 0.4694257 | None | None | N |
D/P | 0.9913 | likely_pathogenic | 0.9822 | pathogenic | -0.171 | Destabilizing | 0.995 | D | 0.691 | prob.neutral | None | None | None | None | N |
D/Q | 0.818 | likely_pathogenic | 0.7233 | pathogenic | -0.602 | Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
D/R | 0.917 | likely_pathogenic | 0.8584 | pathogenic | -0.11 | Destabilizing | 0.999 | D | 0.704 | prob.neutral | None | None | None | None | N |
D/S | 0.4715 | ambiguous | 0.3977 | ambiguous | -0.87 | Destabilizing | 0.992 | D | 0.638 | neutral | None | None | None | None | N |
D/T | 0.841 | likely_pathogenic | 0.7844 | pathogenic | -0.636 | Destabilizing | 0.997 | D | 0.713 | prob.delet. | None | None | None | None | N |
D/V | 0.7942 | likely_pathogenic | 0.7007 | pathogenic | -0.171 | Destabilizing | 0.998 | D | 0.725 | prob.delet. | N | 0.483033669 | None | None | N |
D/W | 0.985 | likely_pathogenic | 0.9726 | pathogenic | -0.201 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
D/Y | 0.6597 | likely_pathogenic | 0.575 | pathogenic | -0.178 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | N | 0.51726717 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.