Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8493 | 25702;25703;25704 | chr2:178717257;178717256;178717255 | chr2:179581984;179581983;179581982 |
N2AB | 8176 | 24751;24752;24753 | chr2:178717257;178717256;178717255 | chr2:179581984;179581983;179581982 |
N2A | 7249 | 21970;21971;21972 | chr2:178717257;178717256;178717255 | chr2:179581984;179581983;179581982 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/I | None | None | 0.993 | N | 0.42 | 0.355 | 0.380564188046 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
N/K | None | None | 0.946 | N | 0.327 | 0.192 | 0.181679512989 | gnomAD-4.0.0 | 1.5916E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85904E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2479 | likely_benign | 0.2896 | benign | -0.205 | Destabilizing | 0.2 | N | 0.327 | neutral | None | None | None | None | N |
N/C | 0.4683 | ambiguous | 0.5104 | ambiguous | 0.379 | Stabilizing | 0.998 | D | 0.436 | neutral | None | None | None | None | N |
N/D | 0.1523 | likely_benign | 0.1393 | benign | 0.125 | Stabilizing | 0.226 | N | 0.335 | neutral | N | 0.488395463 | None | None | N |
N/E | 0.4089 | ambiguous | 0.4102 | ambiguous | 0.078 | Stabilizing | 0.077 | N | 0.173 | neutral | None | None | None | None | N |
N/F | 0.5645 | likely_pathogenic | 0.6025 | pathogenic | -0.664 | Destabilizing | 0.994 | D | 0.409 | neutral | None | None | None | None | N |
N/G | 0.1859 | likely_benign | 0.2061 | benign | -0.35 | Destabilizing | 0.02 | N | 0.121 | neutral | None | None | None | None | N |
N/H | 0.1174 | likely_benign | 0.1244 | benign | -0.406 | Destabilizing | 0.045 | N | 0.199 | neutral | N | 0.458440819 | None | None | N |
N/I | 0.3522 | ambiguous | 0.399 | ambiguous | 0.082 | Stabilizing | 0.993 | D | 0.42 | neutral | N | 0.504537604 | None | None | N |
N/K | 0.3337 | likely_benign | 0.3409 | ambiguous | 0.127 | Stabilizing | 0.946 | D | 0.327 | neutral | N | 0.502538196 | None | None | N |
N/L | 0.297 | likely_benign | 0.3432 | ambiguous | 0.082 | Stabilizing | 0.946 | D | 0.449 | neutral | None | None | None | None | N |
N/M | 0.3674 | ambiguous | 0.4251 | ambiguous | 0.311 | Stabilizing | 0.999 | D | 0.399 | neutral | None | None | None | None | N |
N/P | 0.8178 | likely_pathogenic | 0.8549 | pathogenic | 0.012 | Stabilizing | 0.976 | D | 0.423 | neutral | None | None | None | None | N |
N/Q | 0.29 | likely_benign | 0.3077 | benign | -0.186 | Destabilizing | 0.968 | D | 0.349 | neutral | None | None | None | None | N |
N/R | 0.3762 | ambiguous | 0.3799 | ambiguous | 0.179 | Stabilizing | 0.959 | D | 0.342 | neutral | None | None | None | None | N |
N/S | 0.0746 | likely_benign | 0.0844 | benign | 0.032 | Stabilizing | 0.371 | N | 0.333 | neutral | N | 0.507482656 | None | None | N |
N/T | 0.1614 | likely_benign | 0.1973 | benign | 0.113 | Stabilizing | 0.816 | D | 0.333 | neutral | N | 0.462035217 | None | None | N |
N/V | 0.3663 | ambiguous | 0.4173 | ambiguous | 0.012 | Stabilizing | 0.839 | D | 0.43 | neutral | None | None | None | None | N |
N/W | 0.8036 | likely_pathogenic | 0.8109 | pathogenic | -0.719 | Destabilizing | 0.999 | D | 0.513 | neutral | None | None | None | None | N |
N/Y | 0.2391 | likely_benign | 0.2469 | benign | -0.428 | Destabilizing | 0.984 | D | 0.409 | neutral | N | 0.492927809 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.