Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8498 | 25717;25718;25719 | chr2:178717242;178717241;178717240 | chr2:179581969;179581968;179581967 |
N2AB | 8181 | 24766;24767;24768 | chr2:178717242;178717241;178717240 | chr2:179581969;179581968;179581967 |
N2A | 7254 | 21985;21986;21987 | chr2:178717242;178717241;178717240 | chr2:179581969;179581968;179581967 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs1225974862 | -0.136 | 0.001 | N | 0.186 | 0.147 | 0.191931220699 | gnomAD-2.1.1 | 7.13E-06 | None | None | None | None | N | None | 8.27E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/A | rs1225974862 | -0.136 | 0.001 | N | 0.186 | 0.147 | 0.191931220699 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/A | rs1225974862 | -0.136 | 0.001 | N | 0.186 | 0.147 | 0.191931220699 | gnomAD-4.0.0 | 2.47906E-06 | None | None | None | None | N | None | 4.00673E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.60138E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0919 | likely_benign | 0.0785 | benign | -0.332 | Destabilizing | 0.001 | N | 0.186 | neutral | N | 0.484457521 | None | None | N |
P/C | 0.7624 | likely_pathogenic | 0.7138 | pathogenic | -0.635 | Destabilizing | 0.96 | D | 0.356 | neutral | None | None | None | None | N |
P/D | 0.7409 | likely_pathogenic | 0.7119 | pathogenic | -0.364 | Destabilizing | 0.067 | N | 0.335 | neutral | None | None | None | None | N |
P/E | 0.5064 | ambiguous | 0.478 | ambiguous | -0.475 | Destabilizing | 0.102 | N | 0.271 | neutral | None | None | None | None | N |
P/F | 0.6514 | likely_pathogenic | 0.575 | pathogenic | -0.643 | Destabilizing | 0.927 | D | 0.372 | neutral | None | None | None | None | N |
P/G | 0.403 | ambiguous | 0.3387 | benign | -0.433 | Destabilizing | 0.132 | N | 0.281 | neutral | None | None | None | None | N |
P/H | 0.3393 | likely_benign | 0.298 | benign | -0.055 | Destabilizing | 0.988 | D | 0.339 | neutral | N | 0.488783883 | None | None | N |
P/I | 0.4311 | ambiguous | 0.3775 | ambiguous | -0.211 | Destabilizing | 0.646 | D | 0.333 | neutral | None | None | None | None | N |
P/K | 0.556 | ambiguous | 0.5194 | ambiguous | -0.393 | Destabilizing | 0.784 | D | 0.27 | neutral | None | None | None | None | N |
P/L | 0.1737 | likely_benign | 0.1433 | benign | -0.211 | Destabilizing | 0.009 | N | 0.261 | neutral | N | 0.519879603 | None | None | N |
P/M | 0.3914 | ambiguous | 0.3343 | benign | -0.45 | Destabilizing | 0.827 | D | 0.34 | neutral | None | None | None | None | N |
P/N | 0.4913 | ambiguous | 0.4291 | ambiguous | -0.143 | Destabilizing | 0.312 | N | 0.343 | neutral | None | None | None | None | N |
P/Q | 0.2504 | likely_benign | 0.215 | benign | -0.361 | Destabilizing | 0.827 | D | 0.346 | neutral | None | None | None | None | N |
P/R | 0.3845 | ambiguous | 0.3569 | ambiguous | 0.066 | Stabilizing | 0.906 | D | 0.347 | neutral | D | 0.523938629 | None | None | N |
P/S | 0.1693 | likely_benign | 0.1456 | benign | -0.442 | Destabilizing | 0.004 | N | 0.168 | neutral | N | 0.421155404 | None | None | N |
P/T | 0.1245 | likely_benign | 0.113 | benign | -0.456 | Destabilizing | 0.146 | N | 0.282 | neutral | N | 0.465506401 | None | None | N |
P/V | 0.2822 | likely_benign | 0.2428 | benign | -0.22 | Destabilizing | 0.242 | N | 0.291 | neutral | None | None | None | None | N |
P/W | 0.7756 | likely_pathogenic | 0.7185 | pathogenic | -0.735 | Destabilizing | 0.997 | D | 0.459 | neutral | None | None | None | None | N |
P/Y | 0.6347 | likely_pathogenic | 0.5845 | pathogenic | -0.433 | Destabilizing | 0.987 | D | 0.367 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.