Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8512 | 25759;25760;25761 | chr2:178717200;178717199;178717198 | chr2:179581927;179581926;179581925 |
N2AB | 8195 | 24808;24809;24810 | chr2:178717200;178717199;178717198 | chr2:179581927;179581926;179581925 |
N2A | 7268 | 22027;22028;22029 | chr2:178717200;178717199;178717198 | chr2:179581927;179581926;179581925 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs764620561 | 0.193 | 0.995 | N | 0.677 | 0.446 | 0.452450644169 | gnomAD-2.1.1 | 7.14E-06 | None | None | None | None | N | None | 0 | 2.83E-05 | None | 0 | 0 | None | 0 | None | 0 | 7.81E-06 | 0 |
T/I | rs764620561 | 0.193 | 0.995 | N | 0.677 | 0.446 | 0.452450644169 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs764620561 | 0.193 | 0.995 | N | 0.677 | 0.446 | 0.452450644169 | gnomAD-4.0.0 | 3.71849E-06 | None | None | None | None | N | None | 0 | 1.66711E-05 | None | 0 | 0 | None | 0 | 0 | 2.54308E-06 | 0 | 3.20338E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0869 | likely_benign | 0.0865 | benign | -1.072 | Destabilizing | 0.308 | N | 0.478 | neutral | N | 0.509358752 | None | None | N |
T/C | 0.3922 | ambiguous | 0.412 | ambiguous | -0.835 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
T/D | 0.447 | ambiguous | 0.4649 | ambiguous | -1.463 | Destabilizing | 0.898 | D | 0.631 | neutral | None | None | None | None | N |
T/E | 0.3019 | likely_benign | 0.3164 | benign | -1.317 | Destabilizing | 0.967 | D | 0.607 | neutral | None | None | None | None | N |
T/F | 0.1499 | likely_benign | 0.1594 | benign | -0.872 | Destabilizing | 0.999 | D | 0.645 | neutral | None | None | None | None | N |
T/G | 0.2995 | likely_benign | 0.3024 | benign | -1.459 | Destabilizing | 0.974 | D | 0.622 | neutral | None | None | None | None | N |
T/H | 0.1991 | likely_benign | 0.2068 | benign | -1.718 | Destabilizing | 0.114 | N | 0.499 | neutral | None | None | None | None | N |
T/I | 0.1161 | likely_benign | 0.1233 | benign | -0.078 | Destabilizing | 0.995 | D | 0.677 | prob.neutral | N | 0.496392242 | None | None | N |
T/K | 0.2632 | likely_benign | 0.2736 | benign | -0.727 | Destabilizing | 0.954 | D | 0.607 | neutral | None | None | None | None | N |
T/L | 0.0881 | likely_benign | 0.0938 | benign | -0.078 | Destabilizing | 0.976 | D | 0.613 | neutral | None | None | None | None | N |
T/M | 0.0801 | likely_benign | 0.0831 | benign | 0.09 | Stabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | N |
T/N | 0.1352 | likely_benign | 0.136 | benign | -1.289 | Destabilizing | 0.869 | D | 0.605 | neutral | N | 0.501528703 | None | None | N |
T/P | 0.6936 | likely_pathogenic | 0.6952 | pathogenic | -0.376 | Destabilizing | 0.979 | D | 0.679 | prob.neutral | N | 0.50538779 | None | None | N |
T/Q | 0.2138 | likely_benign | 0.2218 | benign | -1.188 | Destabilizing | 0.985 | D | 0.675 | prob.neutral | None | None | None | None | N |
T/R | 0.198 | likely_benign | 0.2078 | benign | -0.802 | Destabilizing | 0.256 | N | 0.494 | neutral | None | None | None | None | N |
T/S | 0.0973 | likely_benign | 0.0969 | benign | -1.471 | Destabilizing | 0.012 | N | 0.241 | neutral | N | 0.443613763 | None | None | N |
T/V | 0.1009 | likely_benign | 0.1063 | benign | -0.376 | Destabilizing | 0.967 | D | 0.624 | neutral | None | None | None | None | N |
T/W | 0.4883 | ambiguous | 0.5121 | ambiguous | -0.986 | Destabilizing | 1.0 | D | 0.644 | neutral | None | None | None | None | N |
T/Y | 0.195 | likely_benign | 0.2053 | benign | -0.634 | Destabilizing | 0.997 | D | 0.655 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.