Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8516 | 25771;25772;25773 | chr2:178717188;178717187;178717186 | chr2:179581915;179581914;179581913 |
N2AB | 8199 | 24820;24821;24822 | chr2:178717188;178717187;178717186 | chr2:179581915;179581914;179581913 |
N2A | 7272 | 22039;22040;22041 | chr2:178717188;178717187;178717186 | chr2:179581915;179581914;179581913 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs775937094 | -1.145 | 0.998 | D | 0.577 | 0.222 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/F | rs775937094 | -1.145 | 0.998 | D | 0.577 | 0.222 | None | gnomAD-4.0.0 | 4.95814E-06 | None | None | None | None | N | None | 1.33515E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 5.93391E-06 | 0 | 0 |
L/V | rs775937094 | None | 0.841 | N | 0.483 | 0.217 | 0.687436468124 | gnomAD-4.0.0 | 4.1058E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49783E-06 | 0 | 1.65728E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3859 | ambiguous | 0.4437 | ambiguous | -1.098 | Destabilizing | 0.989 | D | 0.493 | neutral | None | None | None | None | N |
L/C | 0.7726 | likely_pathogenic | 0.7959 | pathogenic | -0.856 | Destabilizing | 1.0 | D | 0.609 | neutral | None | None | None | None | N |
L/D | 0.8509 | likely_pathogenic | 0.8808 | pathogenic | -0.005 | Destabilizing | 0.997 | D | 0.715 | prob.delet. | None | None | None | None | N |
L/E | 0.5277 | ambiguous | 0.5912 | pathogenic | -0.041 | Destabilizing | 0.991 | D | 0.639 | neutral | None | None | None | None | N |
L/F | 0.2045 | likely_benign | 0.2275 | benign | -0.829 | Destabilizing | 0.998 | D | 0.577 | neutral | D | 0.533539547 | None | None | N |
L/G | 0.6295 | likely_pathogenic | 0.672 | pathogenic | -1.347 | Destabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | N |
L/H | 0.3769 | ambiguous | 0.4066 | ambiguous | -0.532 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | N | 0.510297328 | None | None | N |
L/I | 0.1318 | likely_benign | 0.1506 | benign | -0.53 | Destabilizing | 0.924 | D | 0.46 | neutral | N | 0.516031221 | None | None | N |
L/K | 0.4158 | ambiguous | 0.4503 | ambiguous | -0.501 | Destabilizing | 0.822 | D | 0.579 | neutral | None | None | None | None | N |
L/M | 0.1363 | likely_benign | 0.1458 | benign | -0.472 | Destabilizing | 0.996 | D | 0.576 | neutral | None | None | None | None | N |
L/N | 0.4911 | ambiguous | 0.5195 | ambiguous | -0.312 | Destabilizing | 0.998 | D | 0.722 | prob.delet. | None | None | None | None | N |
L/P | 0.5943 | likely_pathogenic | 0.6341 | pathogenic | -0.686 | Destabilizing | 0.328 | N | 0.45 | neutral | N | 0.510932046 | None | None | N |
L/Q | 0.173 | likely_benign | 0.2008 | benign | -0.499 | Destabilizing | 0.77 | D | 0.405 | neutral | None | None | None | None | N |
L/R | 0.3235 | likely_benign | 0.3456 | ambiguous | 0.004 | Stabilizing | 0.989 | D | 0.689 | prob.neutral | N | 0.45736692 | None | None | N |
L/S | 0.3855 | ambiguous | 0.4474 | ambiguous | -0.985 | Destabilizing | 0.997 | D | 0.579 | neutral | None | None | None | None | N |
L/T | 0.3096 | likely_benign | 0.3649 | ambiguous | -0.902 | Destabilizing | 0.995 | D | 0.546 | neutral | None | None | None | None | N |
L/V | 0.1289 | likely_benign | 0.1623 | benign | -0.686 | Destabilizing | 0.841 | D | 0.483 | neutral | N | 0.516935298 | None | None | N |
L/W | 0.3672 | ambiguous | 0.3973 | ambiguous | -0.814 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
L/Y | 0.5098 | ambiguous | 0.5465 | ambiguous | -0.567 | Destabilizing | 0.989 | D | 0.644 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.