Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8518 | 25777;25778;25779 | chr2:178717182;178717181;178717180 | chr2:179581909;179581908;179581907 |
N2AB | 8201 | 24826;24827;24828 | chr2:178717182;178717181;178717180 | chr2:179581909;179581908;179581907 |
N2A | 7274 | 22045;22046;22047 | chr2:178717182;178717181;178717180 | chr2:179581909;179581908;179581907 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.005 | N | 0.41 | 0.156 | 0.334659703779 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1936 | likely_benign | 0.1905 | benign | -1.865 | Destabilizing | 0.001 | N | 0.163 | neutral | N | 0.479803849 | None | None | N |
V/C | 0.9122 | likely_pathogenic | 0.9213 | pathogenic | -1.748 | Destabilizing | 0.002 | N | 0.419 | neutral | None | None | None | None | N |
V/D | 0.974 | likely_pathogenic | 0.9731 | pathogenic | -1.845 | Destabilizing | 0.993 | D | 0.627 | neutral | None | None | None | None | N |
V/E | 0.9476 | likely_pathogenic | 0.9506 | pathogenic | -1.756 | Destabilizing | 0.942 | D | 0.595 | neutral | D | 0.547031257 | None | None | N |
V/F | 0.7572 | likely_pathogenic | 0.802 | pathogenic | -1.302 | Destabilizing | 0.806 | D | 0.613 | neutral | None | None | None | None | N |
V/G | 0.5313 | ambiguous | 0.5374 | ambiguous | -2.26 | Highly Destabilizing | 0.385 | N | 0.575 | neutral | D | 0.547031257 | None | None | N |
V/H | 0.9856 | likely_pathogenic | 0.9874 | pathogenic | -1.683 | Destabilizing | 0.964 | D | 0.58 | neutral | None | None | None | None | N |
V/I | 0.1234 | likely_benign | 0.1322 | benign | -0.826 | Destabilizing | None | N | 0.228 | neutral | N | 0.497319486 | None | None | N |
V/K | 0.9786 | likely_pathogenic | 0.9797 | pathogenic | -1.39 | Destabilizing | 0.979 | D | 0.597 | neutral | None | None | None | None | N |
V/L | 0.4798 | ambiguous | 0.5616 | ambiguous | -0.826 | Destabilizing | 0.005 | N | 0.41 | neutral | N | 0.49214538 | None | None | N |
V/M | 0.4381 | ambiguous | 0.5005 | ambiguous | -0.954 | Destabilizing | 0.748 | D | 0.537 | neutral | None | None | None | None | N |
V/N | 0.9091 | likely_pathogenic | 0.9102 | pathogenic | -1.41 | Destabilizing | 0.955 | D | 0.641 | neutral | None | None | None | None | N |
V/P | 0.8757 | likely_pathogenic | 0.8696 | pathogenic | -1.142 | Destabilizing | 0.876 | D | 0.589 | neutral | None | None | None | None | N |
V/Q | 0.9492 | likely_pathogenic | 0.9565 | pathogenic | -1.493 | Destabilizing | 0.99 | D | 0.589 | neutral | None | None | None | None | N |
V/R | 0.9604 | likely_pathogenic | 0.9634 | pathogenic | -1.02 | Destabilizing | 0.99 | D | 0.645 | neutral | None | None | None | None | N |
V/S | 0.5587 | ambiguous | 0.5447 | ambiguous | -2.086 | Highly Destabilizing | 0.111 | N | 0.533 | neutral | None | None | None | None | N |
V/T | 0.2908 | likely_benign | 0.2665 | benign | -1.872 | Destabilizing | 0.091 | N | 0.499 | neutral | None | None | None | None | N |
V/W | 0.9903 | likely_pathogenic | 0.9927 | pathogenic | -1.509 | Destabilizing | 0.99 | D | 0.601 | neutral | None | None | None | None | N |
V/Y | 0.9682 | likely_pathogenic | 0.9751 | pathogenic | -1.204 | Destabilizing | 0.766 | D | 0.626 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.