Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8527 | 25804;25805;25806 | chr2:178717155;178717154;178717153 | chr2:179581882;179581881;179581880 |
N2AB | 8210 | 24853;24854;24855 | chr2:178717155;178717154;178717153 | chr2:179581882;179581881;179581880 |
N2A | 7283 | 22072;22073;22074 | chr2:178717155;178717154;178717153 | chr2:179581882;179581881;179581880 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1560626573 | None | 0.793 | N | 0.367 | 0.321 | 0.484763619824 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
T/I | rs1560626573 | None | 0.793 | N | 0.367 | 0.321 | 0.484763619824 | gnomAD-4.0.0 | 2.7373E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59837E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1063 | likely_benign | 0.1018 | benign | -1.119 | Destabilizing | 0.943 | D | 0.444 | neutral | N | 0.497691203 | None | None | N |
T/C | 0.4973 | ambiguous | 0.4918 | ambiguous | -0.828 | Destabilizing | 1.0 | D | 0.49 | neutral | None | None | None | None | N |
T/D | 0.5789 | likely_pathogenic | 0.5826 | pathogenic | -1.75 | Destabilizing | 0.996 | D | 0.491 | neutral | None | None | None | None | N |
T/E | 0.5014 | ambiguous | 0.4998 | ambiguous | -1.536 | Destabilizing | 1.0 | D | 0.448 | neutral | None | None | None | None | N |
T/F | 0.245 | likely_benign | 0.2458 | benign | -0.795 | Destabilizing | 0.931 | D | 0.491 | neutral | None | None | None | None | N |
T/G | 0.3781 | ambiguous | 0.3744 | ambiguous | -1.527 | Destabilizing | 0.998 | D | 0.505 | neutral | None | None | None | None | N |
T/H | 0.2839 | likely_benign | 0.2758 | benign | -1.654 | Destabilizing | 0.999 | D | 0.58 | neutral | None | None | None | None | N |
T/I | 0.1329 | likely_benign | 0.1367 | benign | -0.042 | Destabilizing | 0.793 | D | 0.367 | neutral | N | 0.464761149 | None | None | N |
T/K | 0.3317 | likely_benign | 0.3255 | benign | -0.363 | Destabilizing | 1.0 | D | 0.43 | neutral | None | None | None | None | N |
T/L | 0.1149 | likely_benign | 0.1175 | benign | -0.042 | Destabilizing | 0.997 | D | 0.45 | neutral | None | None | None | None | N |
T/M | 0.1042 | likely_benign | 0.1062 | benign | -0.073 | Destabilizing | 1.0 | D | 0.505 | neutral | None | None | None | None | N |
T/N | 0.173 | likely_benign | 0.1731 | benign | -1.155 | Destabilizing | 0.994 | D | 0.447 | neutral | N | 0.507098952 | None | None | N |
T/P | 0.7815 | likely_pathogenic | 0.7999 | pathogenic | -0.372 | Destabilizing | 0.998 | D | 0.504 | neutral | D | 0.525456697 | None | None | N |
T/Q | 0.3005 | likely_benign | 0.2927 | benign | -0.905 | Destabilizing | 0.996 | D | 0.501 | neutral | None | None | None | None | N |
T/R | 0.2281 | likely_benign | 0.2281 | benign | -0.66 | Destabilizing | 0.974 | D | 0.368 | neutral | None | None | None | None | N |
T/S | 0.1166 | likely_benign | 0.1144 | benign | -1.323 | Destabilizing | 0.94 | D | 0.469 | neutral | N | 0.496884447 | None | None | N |
T/V | 0.1196 | likely_benign | 0.1223 | benign | -0.372 | Destabilizing | 0.982 | D | 0.445 | neutral | None | None | None | None | N |
T/W | 0.6543 | likely_pathogenic | 0.6481 | pathogenic | -1.013 | Destabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | N |
T/Y | 0.3115 | likely_benign | 0.3026 | benign | -0.605 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.