Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8529 | 25810;25811;25812 | chr2:178717149;178717148;178717147 | chr2:179581876;179581875;179581874 |
N2AB | 8212 | 24859;24860;24861 | chr2:178717149;178717148;178717147 | chr2:179581876;179581875;179581874 |
N2A | 7285 | 22078;22079;22080 | chr2:178717149;178717148;178717147 | chr2:179581876;179581875;179581874 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 0.967 | N | 0.595 | 0.371 | 0.595757661845 | gnomAD-4.0.0 | 1.59197E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43316E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.2478 | likely_benign | 0.2218 | benign | -2.081 | Highly Destabilizing | 0.088 | N | 0.504 | neutral | None | None | None | None | I |
Y/C | 0.124 | likely_benign | 0.1293 | benign | -0.565 | Destabilizing | 0.967 | D | 0.595 | neutral | N | 0.491377549 | None | None | I |
Y/D | 0.2314 | likely_benign | 0.226 | benign | -0.308 | Destabilizing | 0.15 | N | 0.532 | neutral | N | 0.513028202 | None | None | I |
Y/E | 0.4214 | ambiguous | 0.4081 | ambiguous | -0.253 | Destabilizing | 0.006 | N | 0.463 | neutral | None | None | None | None | I |
Y/F | 0.0691 | likely_benign | 0.0669 | benign | -0.991 | Destabilizing | None | N | 0.226 | neutral | N | 0.482206649 | None | None | I |
Y/G | 0.3382 | likely_benign | 0.3191 | benign | -2.368 | Highly Destabilizing | 0.162 | N | 0.519 | neutral | None | None | None | None | I |
Y/H | 0.1025 | likely_benign | 0.0976 | benign | -0.743 | Destabilizing | None | N | 0.214 | neutral | N | 0.463178171 | None | None | I |
Y/I | 0.2135 | likely_benign | 0.2024 | benign | -1.237 | Destabilizing | 0.009 | N | 0.563 | neutral | None | None | None | None | I |
Y/K | 0.4297 | ambiguous | 0.4164 | ambiguous | -0.672 | Destabilizing | 0.012 | N | 0.511 | neutral | None | None | None | None | I |
Y/L | 0.247 | likely_benign | 0.2303 | benign | -1.237 | Destabilizing | 0.004 | N | 0.439 | neutral | None | None | None | None | I |
Y/M | 0.3344 | likely_benign | 0.3121 | benign | -0.781 | Destabilizing | 0.5 | D | 0.55 | neutral | None | None | None | None | I |
Y/N | 0.1072 | likely_benign | 0.0983 | benign | -0.834 | Destabilizing | 0.15 | N | 0.553 | neutral | N | 0.479184987 | None | None | I |
Y/P | 0.9551 | likely_pathogenic | 0.9535 | pathogenic | -1.51 | Destabilizing | 0.487 | N | 0.661 | neutral | None | None | None | None | I |
Y/Q | 0.2553 | likely_benign | 0.2419 | benign | -0.855 | Destabilizing | 0.005 | N | 0.339 | neutral | None | None | None | None | I |
Y/R | 0.2789 | likely_benign | 0.2748 | benign | -0.16 | Destabilizing | 0.163 | N | 0.58 | neutral | None | None | None | None | I |
Y/S | 0.0898 | likely_benign | 0.0778 | benign | -1.446 | Destabilizing | 0.014 | N | 0.465 | neutral | N | 0.421907552 | None | None | I |
Y/T | 0.1462 | likely_benign | 0.1278 | benign | -1.302 | Destabilizing | 0.006 | N | 0.463 | neutral | None | None | None | None | I |
Y/V | 0.1707 | likely_benign | 0.1596 | benign | -1.51 | Destabilizing | 0.088 | N | 0.469 | neutral | None | None | None | None | I |
Y/W | 0.3649 | ambiguous | 0.3749 | ambiguous | -0.621 | Destabilizing | 0.85 | D | 0.546 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.