Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8560 | 25903;25904;25905 | chr2:178715736;178715735;178715734 | chr2:179580463;179580462;179580461 |
N2AB | 8243 | 24952;24953;24954 | chr2:178715736;178715735;178715734 | chr2:179580463;179580462;179580461 |
N2A | 7316 | 22171;22172;22173 | chr2:178715736;178715735;178715734 | chr2:179580463;179580462;179580461 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs727504204 | None | None | N | 0.085 | 0.184 | 0.611125358375 | gnomAD-4.0.0 | 1.38592E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.07777E-07 | 1.19474E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1766 | likely_benign | 0.2003 | benign | -0.968 | Destabilizing | 0.088 | N | 0.174 | neutral | None | None | None | None | I |
I/C | 0.6491 | likely_pathogenic | 0.6947 | pathogenic | -0.782 | Destabilizing | 0.884 | D | 0.307 | neutral | None | None | None | None | I |
I/D | 0.5226 | ambiguous | 0.5577 | ambiguous | -0.502 | Destabilizing | 0.517 | D | 0.436 | neutral | None | None | None | None | I |
I/E | 0.3893 | ambiguous | 0.4268 | ambiguous | -0.548 | Destabilizing | 0.441 | N | 0.405 | neutral | None | None | None | None | I |
I/F | 0.1362 | likely_benign | 0.1518 | benign | -0.67 | Destabilizing | None | N | 0.067 | neutral | N | 0.495309233 | None | None | I |
I/G | 0.5102 | ambiguous | 0.5684 | pathogenic | -1.204 | Destabilizing | 0.517 | D | 0.381 | neutral | None | None | None | None | I |
I/H | 0.4011 | ambiguous | 0.4466 | ambiguous | -0.36 | Destabilizing | 0.906 | D | 0.335 | neutral | None | None | None | None | I |
I/K | 0.3252 | likely_benign | 0.3702 | ambiguous | -0.73 | Destabilizing | 0.031 | N | 0.402 | neutral | None | None | None | None | I |
I/L | 0.1011 | likely_benign | 0.1068 | benign | -0.435 | Destabilizing | None | N | 0.078 | neutral | N | 0.4564442 | None | None | I |
I/M | 0.0843 | likely_benign | 0.0887 | benign | -0.512 | Destabilizing | 0.253 | N | 0.261 | neutral | N | 0.488997693 | None | None | I |
I/N | 0.1825 | likely_benign | 0.1983 | benign | -0.558 | Destabilizing | 0.447 | N | 0.457 | neutral | N | 0.514278995 | None | None | I |
I/P | 0.5905 | likely_pathogenic | 0.6446 | pathogenic | -0.58 | Destabilizing | 0.884 | D | 0.443 | neutral | None | None | None | None | I |
I/Q | 0.3387 | likely_benign | 0.3816 | ambiguous | -0.746 | Destabilizing | 0.759 | D | 0.401 | neutral | None | None | None | None | I |
I/R | 0.2498 | likely_benign | 0.2927 | benign | -0.134 | Destabilizing | 0.599 | D | 0.438 | neutral | None | None | None | None | I |
I/S | 0.1803 | likely_benign | 0.2019 | benign | -1.059 | Destabilizing | 0.143 | N | 0.223 | neutral | N | 0.50675559 | None | None | I |
I/T | 0.0805 | likely_benign | 0.0886 | benign | -0.992 | Destabilizing | None | N | 0.085 | neutral | N | 0.4723923 | None | None | I |
I/V | 0.0677 | likely_benign | 0.0674 | benign | -0.58 | Destabilizing | None | N | 0.074 | neutral | N | 0.440549241 | None | None | I |
I/W | 0.6375 | likely_pathogenic | 0.6924 | pathogenic | -0.701 | Destabilizing | 0.992 | D | 0.323 | neutral | None | None | None | None | I |
I/Y | 0.4121 | ambiguous | 0.4462 | ambiguous | -0.484 | Destabilizing | 0.024 | N | 0.314 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.