Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8577 | 25954;25955;25956 | chr2:178715685;178715684;178715683 | chr2:179580412;179580411;179580410 |
N2AB | 8260 | 25003;25004;25005 | chr2:178715685;178715684;178715683 | chr2:179580412;179580411;179580410 |
N2A | 7333 | 22222;22223;22224 | chr2:178715685;178715684;178715683 | chr2:179580412;179580411;179580410 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | None | None | 0.03 | D | 0.261 | 0.602 | 0.418095516054 | gnomAD-4.0.0 | 1.59731E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86814E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2924 | likely_benign | 0.3013 | benign | -0.343 | Destabilizing | 0.02 | N | 0.269 | neutral | D | 0.558164207 | None | None | I |
P/C | 0.913 | likely_pathogenic | 0.9203 | pathogenic | -0.579 | Destabilizing | 0.994 | D | 0.648 | neutral | None | None | None | None | I |
P/D | 0.8251 | likely_pathogenic | 0.8399 | pathogenic | -0.328 | Destabilizing | 0.776 | D | 0.457 | neutral | None | None | None | None | I |
P/E | 0.6203 | likely_pathogenic | 0.6269 | pathogenic | -0.461 | Destabilizing | 0.846 | D | 0.465 | neutral | None | None | None | None | I |
P/F | 0.9192 | likely_pathogenic | 0.9156 | pathogenic | -0.73 | Destabilizing | 0.994 | D | 0.654 | neutral | None | None | None | None | I |
P/G | 0.6864 | likely_pathogenic | 0.707 | pathogenic | -0.433 | Destabilizing | 0.713 | D | 0.519 | neutral | None | None | None | None | I |
P/H | 0.6194 | likely_pathogenic | 0.6263 | pathogenic | -0.111 | Destabilizing | 0.999 | D | 0.571 | neutral | None | None | None | None | I |
P/I | 0.7778 | likely_pathogenic | 0.76 | pathogenic | -0.265 | Destabilizing | 0.977 | D | 0.613 | neutral | None | None | None | None | I |
P/K | 0.6829 | likely_pathogenic | 0.6717 | pathogenic | -0.346 | Destabilizing | 0.989 | D | 0.465 | neutral | None | None | None | None | I |
P/L | 0.4043 | ambiguous | 0.3555 | ambiguous | -0.265 | Destabilizing | 0.903 | D | 0.554 | neutral | D | 0.622922335 | None | None | I |
P/M | 0.7202 | likely_pathogenic | 0.6963 | pathogenic | -0.321 | Destabilizing | 0.996 | D | 0.573 | neutral | None | None | None | None | I |
P/N | 0.7878 | likely_pathogenic | 0.7926 | pathogenic | -0.068 | Destabilizing | 0.956 | D | 0.556 | neutral | None | None | None | None | I |
P/Q | 0.4739 | ambiguous | 0.4721 | ambiguous | -0.334 | Destabilizing | 0.993 | D | 0.453 | neutral | D | 0.52524738 | None | None | I |
P/R | 0.5089 | ambiguous | 0.5014 | ambiguous | 0.152 | Stabilizing | 0.992 | D | 0.564 | neutral | D | 0.631805312 | None | None | I |
P/S | 0.4456 | ambiguous | 0.4688 | ambiguous | -0.371 | Destabilizing | 0.721 | D | 0.437 | neutral | D | 0.562430168 | None | None | I |
P/T | 0.3484 | ambiguous | 0.3348 | benign | -0.41 | Destabilizing | 0.03 | N | 0.261 | neutral | D | 0.622518726 | None | None | I |
P/V | 0.6019 | likely_pathogenic | 0.5904 | pathogenic | -0.258 | Destabilizing | 0.118 | N | 0.264 | neutral | None | None | None | None | I |
P/W | 0.9331 | likely_pathogenic | 0.9339 | pathogenic | -0.808 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
P/Y | 0.905 | likely_pathogenic | 0.9031 | pathogenic | -0.498 | Destabilizing | 0.998 | D | 0.653 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.