Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8579 | 25960;25961;25962 | chr2:178715679;178715678;178715677 | chr2:179580406;179580405;179580404 |
N2AB | 8262 | 25009;25010;25011 | chr2:178715679;178715678;178715677 | chr2:179580406;179580405;179580404 |
N2A | 7335 | 22228;22229;22230 | chr2:178715679;178715678;178715677 | chr2:179580406;179580405;179580404 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.013 | D | 0.349 | 0.307 | 0.513280433867 | gnomAD-4.0.0 | 6.84841E-07 | None | None | None | None | I | None | 2.98989E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | None | None | 0.035 | D | 0.387 | 0.158 | 0.556183318313 | gnomAD-4.0.0 | 1.36968E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99977E-07 | 1.1629E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8812 | likely_pathogenic | 0.8723 | pathogenic | -2.454 | Highly Destabilizing | 0.919 | D | 0.535 | neutral | None | None | None | None | I |
I/C | 0.9536 | likely_pathogenic | 0.9475 | pathogenic | -1.633 | Destabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | I |
I/D | 0.9823 | likely_pathogenic | 0.9819 | pathogenic | -2.653 | Highly Destabilizing | 0.997 | D | 0.689 | prob.neutral | None | None | None | None | I |
I/E | 0.9599 | likely_pathogenic | 0.9572 | pathogenic | -2.502 | Highly Destabilizing | 0.995 | D | 0.683 | prob.neutral | None | None | None | None | I |
I/F | 0.3921 | ambiguous | 0.4039 | ambiguous | -1.555 | Destabilizing | 0.013 | N | 0.349 | neutral | D | 0.534443624 | None | None | I |
I/G | 0.9578 | likely_pathogenic | 0.9545 | pathogenic | -2.942 | Highly Destabilizing | 0.997 | D | 0.692 | prob.neutral | None | None | None | None | I |
I/H | 0.9567 | likely_pathogenic | 0.9549 | pathogenic | -2.384 | Highly Destabilizing | 0.998 | D | 0.633 | neutral | None | None | None | None | I |
I/K | 0.9045 | likely_pathogenic | 0.9024 | pathogenic | -1.873 | Destabilizing | 0.896 | D | 0.691 | prob.neutral | None | None | None | None | I |
I/L | 0.231 | likely_benign | 0.2173 | benign | -1.079 | Destabilizing | None | N | 0.103 | neutral | N | 0.475469891 | None | None | I |
I/M | 0.1307 | likely_benign | 0.129 | benign | -0.879 | Destabilizing | 0.811 | D | 0.596 | neutral | N | 0.485630331 | None | None | I |
I/N | 0.8038 | likely_pathogenic | 0.7909 | pathogenic | -1.982 | Destabilizing | 0.996 | D | 0.696 | prob.neutral | N | 0.518066633 | None | None | I |
I/P | 0.8565 | likely_pathogenic | 0.8477 | pathogenic | -1.515 | Destabilizing | 0.997 | D | 0.692 | prob.neutral | None | None | None | None | I |
I/Q | 0.9228 | likely_pathogenic | 0.919 | pathogenic | -1.971 | Destabilizing | 0.992 | D | 0.682 | prob.neutral | None | None | None | None | I |
I/R | 0.8926 | likely_pathogenic | 0.8889 | pathogenic | -1.446 | Destabilizing | 0.992 | D | 0.7 | prob.neutral | None | None | None | None | I |
I/S | 0.8869 | likely_pathogenic | 0.883 | pathogenic | -2.638 | Highly Destabilizing | 0.984 | D | 0.649 | neutral | D | 0.524746705 | None | None | I |
I/T | 0.8692 | likely_pathogenic | 0.8626 | pathogenic | -2.354 | Highly Destabilizing | 0.862 | D | 0.627 | neutral | N | 0.499455398 | None | None | I |
I/V | 0.1879 | likely_benign | 0.1901 | benign | -1.515 | Destabilizing | 0.035 | N | 0.387 | neutral | D | 0.533750191 | None | None | I |
I/W | 0.9395 | likely_pathogenic | 0.94 | pathogenic | -1.907 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | I |
I/Y | 0.8421 | likely_pathogenic | 0.8405 | pathogenic | -1.643 | Destabilizing | 0.526 | D | 0.656 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.