Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8580 | 25963;25964;25965 | chr2:178715676;178715675;178715674 | chr2:179580403;179580402;179580401 |
N2AB | 8263 | 25012;25013;25014 | chr2:178715676;178715675;178715674 | chr2:179580403;179580402;179580401 |
N2A | 7336 | 22231;22232;22233 | chr2:178715676;178715675;178715674 | chr2:179580403;179580402;179580401 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | None | N | 0.134 | 0.103 | 0.267299060538 | gnomAD-4.0.0 | 1.59385E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43674E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2534 | likely_benign | 0.256 | benign | -0.252 | Destabilizing | 0.359 | N | 0.486 | neutral | None | None | None | None | I |
K/C | 0.6706 | likely_pathogenic | 0.6738 | pathogenic | -0.332 | Destabilizing | 0.996 | D | 0.587 | neutral | None | None | None | None | I |
K/D | 0.3849 | ambiguous | 0.3804 | ambiguous | -0.129 | Destabilizing | 0.576 | D | 0.516 | neutral | None | None | None | None | I |
K/E | 0.1112 | likely_benign | 0.1125 | benign | -0.035 | Destabilizing | 0.202 | N | 0.472 | neutral | N | 0.490055341 | None | None | I |
K/F | 0.6752 | likely_pathogenic | 0.6856 | pathogenic | 0.039 | Stabilizing | 0.959 | D | 0.596 | neutral | None | None | None | None | I |
K/G | 0.3908 | ambiguous | 0.3937 | ambiguous | -0.582 | Destabilizing | 0.576 | D | 0.548 | neutral | None | None | None | None | I |
K/H | 0.1951 | likely_benign | 0.2002 | benign | -0.837 | Destabilizing | 0.889 | D | 0.556 | neutral | None | None | None | None | I |
K/I | 0.288 | likely_benign | 0.3011 | benign | 0.584 | Stabilizing | 0.3 | N | 0.609 | neutral | N | 0.518591524 | None | None | I |
K/L | 0.2895 | likely_benign | 0.2971 | benign | 0.584 | Stabilizing | 0.074 | N | 0.557 | neutral | None | None | None | None | I |
K/M | 0.1949 | likely_benign | 0.2011 | benign | 0.19 | Stabilizing | 0.875 | D | 0.541 | neutral | None | None | None | None | I |
K/N | 0.2581 | likely_benign | 0.2495 | benign | -0.253 | Destabilizing | 0.006 | N | 0.321 | neutral | N | 0.510086684 | None | None | I |
K/P | 0.8144 | likely_pathogenic | 0.7962 | pathogenic | 0.335 | Stabilizing | 0.951 | D | 0.582 | neutral | None | None | None | None | I |
K/Q | 0.0963 | likely_benign | 0.1 | benign | -0.265 | Destabilizing | 0.198 | N | 0.499 | neutral | N | 0.496117309 | None | None | I |
K/R | 0.0754 | likely_benign | 0.0767 | benign | -0.472 | Destabilizing | None | N | 0.134 | neutral | N | 0.484862952 | None | None | I |
K/S | 0.2537 | likely_benign | 0.2547 | benign | -0.732 | Destabilizing | 0.095 | N | 0.198 | neutral | None | None | None | None | I |
K/T | 0.1043 | likely_benign | 0.1083 | benign | -0.451 | Destabilizing | 0.235 | N | 0.519 | neutral | N | 0.487401825 | None | None | I |
K/V | 0.2517 | likely_benign | 0.2606 | benign | 0.335 | Stabilizing | 0.427 | N | 0.603 | neutral | None | None | None | None | I |
K/W | 0.6199 | likely_pathogenic | 0.648 | pathogenic | 0.051 | Stabilizing | 0.997 | D | 0.639 | neutral | None | None | None | None | I |
K/Y | 0.5346 | ambiguous | 0.5423 | ambiguous | 0.329 | Stabilizing | 0.732 | D | 0.605 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.