Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8581 | 25966;25967;25968 | chr2:178715673;178715672;178715671 | chr2:179580400;179580399;179580398 |
N2AB | 8264 | 25015;25016;25017 | chr2:178715673;178715672;178715671 | chr2:179580400;179580399;179580398 |
N2A | 7337 | 22234;22235;22236 | chr2:178715673;178715672;178715671 | chr2:179580400;179580399;179580398 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.007 | D | 0.602 | 0.578 | 0.689457545739 | gnomAD-4.0.0 | 6.84702E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99863E-07 | 0 | 0 |
V/I | rs1014791707 | None | None | N | 0.285 | 0.178 | 0.518092603711 | gnomAD-4.0.0 | 3.42351E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52309E-05 | None | 0 | 0 | 2.69959E-06 | 1.16198E-05 | 0 |
V/L | rs1014791707 | -0.552 | 0.006 | D | 0.519 | 0.505 | 0.48286525802 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.63E-05 | None | 0 | None | 0 | 0 | 0 |
V/L | rs1014791707 | -0.552 | 0.006 | D | 0.519 | 0.505 | 0.48286525802 | gnomAD-4.0.0 | 1.36941E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.04643E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4896 | ambiguous | 0.562 | ambiguous | -1.881 | Destabilizing | 0.335 | N | 0.695 | prob.neutral | D | 0.595909078 | None | None | N |
V/C | 0.9277 | likely_pathogenic | 0.929 | pathogenic | -1.057 | Destabilizing | 0.982 | D | 0.757 | deleterious | None | None | None | None | N |
V/D | 0.976 | likely_pathogenic | 0.9723 | pathogenic | -2.423 | Highly Destabilizing | 0.898 | D | 0.855 | deleterious | D | 0.634296608 | None | None | N |
V/E | 0.9564 | likely_pathogenic | 0.9482 | pathogenic | -2.255 | Highly Destabilizing | 0.654 | D | 0.84 | deleterious | None | None | None | None | N |
V/F | 0.543 | ambiguous | 0.5226 | ambiguous | -1.218 | Destabilizing | 0.007 | N | 0.602 | neutral | D | 0.537433946 | None | None | N |
V/G | 0.6766 | likely_pathogenic | 0.7035 | pathogenic | -2.334 | Highly Destabilizing | 0.923 | D | 0.809 | deleterious | D | 0.634296608 | None | None | N |
V/H | 0.9837 | likely_pathogenic | 0.98 | pathogenic | -2.012 | Highly Destabilizing | 0.986 | D | 0.837 | deleterious | None | None | None | None | N |
V/I | 0.0978 | likely_benign | 0.09 | benign | -0.637 | Destabilizing | None | N | 0.285 | neutral | N | 0.473422169 | None | None | N |
V/K | 0.9705 | likely_pathogenic | 0.9634 | pathogenic | -1.598 | Destabilizing | 0.805 | D | 0.839 | deleterious | None | None | None | None | N |
V/L | 0.5144 | ambiguous | 0.4599 | ambiguous | -0.637 | Destabilizing | 0.006 | N | 0.519 | neutral | D | 0.547165219 | None | None | N |
V/M | 0.4386 | ambiguous | 0.4032 | ambiguous | -0.432 | Destabilizing | 0.155 | N | 0.62 | neutral | None | None | None | None | N |
V/N | 0.9332 | likely_pathogenic | 0.9255 | pathogenic | -1.723 | Destabilizing | 0.651 | D | 0.85 | deleterious | None | None | None | None | N |
V/P | 0.9016 | likely_pathogenic | 0.8941 | pathogenic | -1.025 | Destabilizing | 0.651 | D | 0.849 | deleterious | None | None | None | None | N |
V/Q | 0.9569 | likely_pathogenic | 0.9483 | pathogenic | -1.682 | Destabilizing | 0.746 | D | 0.836 | deleterious | None | None | None | None | N |
V/R | 0.9571 | likely_pathogenic | 0.9488 | pathogenic | -1.31 | Destabilizing | 0.898 | D | 0.848 | deleterious | None | None | None | None | N |
V/S | 0.7822 | likely_pathogenic | 0.8047 | pathogenic | -2.242 | Highly Destabilizing | 0.826 | D | 0.809 | deleterious | None | None | None | None | N |
V/T | 0.6003 | likely_pathogenic | 0.6205 | pathogenic | -1.953 | Destabilizing | 0.212 | N | 0.711 | prob.delet. | None | None | None | None | N |
V/W | 0.9818 | likely_pathogenic | 0.9794 | pathogenic | -1.69 | Destabilizing | 0.996 | D | 0.836 | deleterious | None | None | None | None | N |
V/Y | 0.9201 | likely_pathogenic | 0.9088 | pathogenic | -1.292 | Destabilizing | 0.685 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.