Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8604 | 26035;26036;26037 | chr2:178715604;178715603;178715602 | chr2:179580331;179580330;179580329 |
N2AB | 8287 | 25084;25085;25086 | chr2:178715604;178715603;178715602 | chr2:179580331;179580330;179580329 |
N2A | 7360 | 22303;22304;22305 | chr2:178715604;178715603;178715602 | chr2:179580331;179580330;179580329 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.954 | N | 0.498 | 0.323 | 0.644857554221 | gnomAD-4.0.0 | 1.59158E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43283E-05 | 0 |
V/M | rs1160730554 | -0.365 | 0.99 | N | 0.75 | 0.323 | 0.556850889111 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/M | rs1160730554 | -0.365 | 0.99 | N | 0.75 | 0.323 | 0.556850889111 | gnomAD-4.0.0 | 1.59157E-06 | None | None | None | None | N | None | 5.66059E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1891 | likely_benign | 0.1841 | benign | -1.607 | Destabilizing | 0.954 | D | 0.498 | neutral | N | 0.491097606 | None | None | N |
V/C | 0.8027 | likely_pathogenic | 0.791 | pathogenic | -1.079 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
V/D | 0.4691 | ambiguous | 0.4496 | ambiguous | -1.568 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
V/E | 0.264 | likely_benign | 0.2577 | benign | -1.522 | Destabilizing | 0.994 | D | 0.768 | deleterious | D | 0.529496377 | None | None | N |
V/F | 0.1628 | likely_benign | 0.164 | benign | -1.13 | Destabilizing | 0.994 | D | 0.785 | deleterious | None | None | None | None | N |
V/G | 0.3332 | likely_benign | 0.3179 | benign | -1.97 | Destabilizing | 0.999 | D | 0.765 | deleterious | N | 0.506987664 | None | None | N |
V/H | 0.5054 | ambiguous | 0.4916 | ambiguous | -1.562 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
V/I | 0.079 | likely_benign | 0.0753 | benign | -0.686 | Destabilizing | 0.471 | N | 0.474 | neutral | None | None | None | None | N |
V/K | 0.284 | likely_benign | 0.2793 | benign | -1.276 | Destabilizing | 0.994 | D | 0.771 | deleterious | None | None | None | None | N |
V/L | 0.165 | likely_benign | 0.169 | benign | -0.686 | Destabilizing | 0.01 | N | 0.277 | neutral | N | 0.499002899 | None | None | N |
V/M | 0.0834 | likely_benign | 0.0865 | benign | -0.569 | Destabilizing | 0.99 | D | 0.75 | deleterious | N | 0.502088745 | None | None | N |
V/N | 0.302 | likely_benign | 0.2923 | benign | -1.148 | Destabilizing | 0.987 | D | 0.791 | deleterious | None | None | None | None | N |
V/P | 0.9499 | likely_pathogenic | 0.9405 | pathogenic | -0.96 | Destabilizing | 0.987 | D | 0.786 | deleterious | None | None | None | None | N |
V/Q | 0.257 | likely_benign | 0.2582 | benign | -1.265 | Destabilizing | 0.997 | D | 0.785 | deleterious | None | None | None | None | N |
V/R | 0.2764 | likely_benign | 0.276 | benign | -0.842 | Destabilizing | 0.997 | D | 0.789 | deleterious | None | None | None | None | N |
V/S | 0.2232 | likely_benign | 0.2151 | benign | -1.71 | Destabilizing | 0.995 | D | 0.753 | deleterious | None | None | None | None | N |
V/T | 0.1343 | likely_benign | 0.1322 | benign | -1.554 | Destabilizing | 0.958 | D | 0.569 | neutral | None | None | None | None | N |
V/W | 0.7547 | likely_pathogenic | 0.733 | pathogenic | -1.4 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
V/Y | 0.5199 | ambiguous | 0.5106 | ambiguous | -1.084 | Destabilizing | 0.997 | D | 0.796 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.