Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8609 | 26050;26051;26052 | chr2:178715589;178715588;178715587 | chr2:179580316;179580315;179580314 |
N2AB | 8292 | 25099;25100;25101 | chr2:178715589;178715588;178715587 | chr2:179580316;179580315;179580314 |
N2A | 7365 | 22318;22319;22320 | chr2:178715589;178715588;178715587 | chr2:179580316;179580315;179580314 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs1407524421 | None | None | N | 0.279 | 0.222 | 0.221019684889 | gnomAD-4.0.0 | 2.05282E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69863E-06 | 0 | 0 |
M/V | rs1369418506 | None | None | N | 0.273 | 0.11 | 0.377274123778 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.9305E-04 | None | 0 | 0 | 0 | 0 | 0 |
M/V | rs1369418506 | None | None | N | 0.273 | 0.11 | 0.377274123778 | gnomAD-4.0.0 | 6.57445E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.9305E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.8047 | likely_pathogenic | 0.805 | pathogenic | -1.636 | Destabilizing | None | N | 0.442 | neutral | None | None | None | None | N |
M/C | 0.9211 | likely_pathogenic | 0.927 | pathogenic | -2.576 | Highly Destabilizing | 0.936 | D | 0.751 | deleterious | None | None | None | None | N |
M/D | 0.9935 | likely_pathogenic | 0.9941 | pathogenic | -2.109 | Highly Destabilizing | 0.937 | D | 0.762 | deleterious | None | None | None | None | N |
M/E | 0.9617 | likely_pathogenic | 0.9641 | pathogenic | -1.853 | Destabilizing | 0.748 | D | 0.716 | prob.delet. | None | None | None | None | N |
M/F | 0.5181 | ambiguous | 0.4998 | ambiguous | -0.291 | Destabilizing | 0.036 | N | 0.574 | neutral | None | None | None | None | N |
M/G | 0.929 | likely_pathogenic | 0.9336 | pathogenic | -2.084 | Highly Destabilizing | 0.141 | N | 0.701 | prob.neutral | None | None | None | None | N |
M/H | 0.9553 | likely_pathogenic | 0.952 | pathogenic | -1.977 | Destabilizing | 0.995 | D | 0.815 | deleterious | None | None | None | None | N |
M/I | 0.3643 | ambiguous | 0.3724 | ambiguous | -0.32 | Destabilizing | None | N | 0.279 | neutral | N | 0.309008042 | None | None | N |
M/K | 0.8557 | likely_pathogenic | 0.8549 | pathogenic | -1.191 | Destabilizing | 0.774 | D | 0.621 | neutral | N | 0.49224015 | None | None | N |
M/L | 0.1976 | likely_benign | 0.1991 | benign | -0.32 | Destabilizing | None | N | 0.263 | neutral | N | 0.392238006 | None | None | N |
M/N | 0.9411 | likely_pathogenic | 0.9395 | pathogenic | -1.757 | Destabilizing | 0.981 | D | 0.775 | deleterious | None | None | None | None | N |
M/P | 0.9951 | likely_pathogenic | 0.9951 | pathogenic | -0.747 | Destabilizing | 0.937 | D | 0.747 | deleterious | None | None | None | None | N |
M/Q | 0.8485 | likely_pathogenic | 0.8458 | pathogenic | -1.351 | Destabilizing | 0.954 | D | 0.654 | neutral | None | None | None | None | N |
M/R | 0.8766 | likely_pathogenic | 0.8753 | pathogenic | -1.551 | Destabilizing | 0.937 | D | 0.677 | prob.neutral | N | 0.49224015 | None | None | N |
M/S | 0.8975 | likely_pathogenic | 0.8962 | pathogenic | -2.097 | Highly Destabilizing | 0.835 | D | 0.609 | neutral | None | None | None | None | N |
M/T | 0.7925 | likely_pathogenic | 0.785 | pathogenic | -1.721 | Destabilizing | 0.696 | D | 0.567 | neutral | N | 0.491733171 | None | None | N |
M/V | 0.2005 | likely_benign | 0.1926 | benign | -0.747 | Destabilizing | None | N | 0.273 | neutral | N | 0.415922942 | None | None | N |
M/W | 0.9334 | likely_pathogenic | 0.9351 | pathogenic | -0.693 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
M/Y | 0.8892 | likely_pathogenic | 0.887 | pathogenic | -0.636 | Destabilizing | 0.965 | D | 0.71 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.