Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8617 | 26074;26075;26076 | chr2:178715565;178715564;178715563 | chr2:179580292;179580291;179580290 |
N2AB | 8300 | 25123;25124;25125 | chr2:178715565;178715564;178715563 | chr2:179580292;179580291;179580290 |
N2A | 7373 | 22342;22343;22344 | chr2:178715565;178715564;178715563 | chr2:179580292;179580291;179580290 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/I | None | None | 0.84 | D | 0.572 | 0.359 | 0.732098058403 | gnomAD-4.0.0 | 1.5916E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85914E-06 | 0 | 0 |
S/N | rs1361559046 | -0.497 | 0.001 | N | 0.198 | 0.173 | 0.213573922156 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
S/N | rs1361559046 | -0.497 | 0.001 | N | 0.198 | 0.173 | 0.213573922156 | gnomAD-4.0.0 | 6.36641E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77316E-05 | None | 0 | 0 | 8.57741E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1162 | likely_benign | 0.1256 | benign | -0.728 | Destabilizing | 0.016 | N | 0.44 | neutral | None | None | None | None | N |
S/C | 0.2825 | likely_benign | 0.2719 | benign | -0.501 | Destabilizing | 0.985 | D | 0.534 | neutral | D | 0.534212786 | None | None | N |
S/D | 0.7487 | likely_pathogenic | 0.6909 | pathogenic | 0.012 | Stabilizing | 0.001 | N | 0.137 | neutral | None | None | None | None | N |
S/E | 0.8177 | likely_pathogenic | 0.7744 | pathogenic | -0.001 | Destabilizing | 0.234 | N | 0.494 | neutral | None | None | None | None | N |
S/F | 0.577 | likely_pathogenic | 0.561 | ambiguous | -0.957 | Destabilizing | 0.966 | D | 0.603 | neutral | None | None | None | None | N |
S/G | 0.1488 | likely_benign | 0.1293 | benign | -0.958 | Destabilizing | 0.379 | N | 0.479 | neutral | D | 0.538140077 | None | None | N |
S/H | 0.7495 | likely_pathogenic | 0.7157 | pathogenic | -1.38 | Destabilizing | 0.966 | D | 0.548 | neutral | None | None | None | None | N |
S/I | 0.4836 | ambiguous | 0.4452 | ambiguous | -0.226 | Destabilizing | 0.84 | D | 0.572 | neutral | D | 0.525312016 | None | None | N |
S/K | 0.9279 | likely_pathogenic | 0.8932 | pathogenic | -0.594 | Destabilizing | 0.798 | D | 0.487 | neutral | None | None | None | None | N |
S/L | 0.2406 | likely_benign | 0.2293 | benign | -0.226 | Destabilizing | 0.664 | D | 0.543 | neutral | None | None | None | None | N |
S/M | 0.3814 | ambiguous | 0.3686 | ambiguous | 0.044 | Stabilizing | 0.991 | D | 0.535 | neutral | None | None | None | None | N |
S/N | 0.3704 | ambiguous | 0.3239 | benign | -0.532 | Destabilizing | 0.001 | N | 0.198 | neutral | N | 0.512941752 | None | None | N |
S/P | 0.9337 | likely_pathogenic | 0.8991 | pathogenic | -0.36 | Destabilizing | 0.883 | D | 0.525 | neutral | None | None | None | None | N |
S/Q | 0.8161 | likely_pathogenic | 0.781 | pathogenic | -0.7 | Destabilizing | 0.966 | D | 0.503 | neutral | None | None | None | None | N |
S/R | 0.8612 | likely_pathogenic | 0.818 | pathogenic | -0.472 | Destabilizing | 0.913 | D | 0.531 | neutral | N | 0.505206298 | None | None | N |
S/T | 0.1223 | likely_benign | 0.1069 | benign | -0.613 | Destabilizing | None | N | 0.161 | neutral | N | 0.50529694 | None | None | N |
S/V | 0.4841 | ambiguous | 0.4523 | ambiguous | -0.36 | Destabilizing | 0.425 | N | 0.537 | neutral | None | None | None | None | N |
S/W | 0.7705 | likely_pathogenic | 0.7352 | pathogenic | -0.901 | Destabilizing | 0.997 | D | 0.666 | neutral | None | None | None | None | N |
S/Y | 0.556 | ambiguous | 0.5406 | ambiguous | -0.643 | Destabilizing | 0.988 | D | 0.593 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.