Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8621 | 26086;26087;26088 | chr2:178715553;178715552;178715551 | chr2:179580280;179580279;179580278 |
N2AB | 8304 | 25135;25136;25137 | chr2:178715553;178715552;178715551 | chr2:179580280;179580279;179580278 |
N2A | 7377 | 22354;22355;22356 | chr2:178715553;178715552;178715551 | chr2:179580280;179580279;179580278 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.998 | N | 0.763 | 0.229 | 0.406668915854 | gnomAD-4.0.0 | 6.84286E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.9957E-07 | 0 | 0 |
T/N | rs899151063 | -1.338 | 0.98 | N | 0.72 | 0.314 | 0.381071309025 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
T/N | rs899151063 | -1.338 | 0.98 | N | 0.72 | 0.314 | 0.381071309025 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/N | rs899151063 | -1.338 | 0.98 | N | 0.72 | 0.314 | 0.381071309025 | gnomAD-4.0.0 | 4.33843E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.93395E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1283 | likely_benign | 0.1151 | benign | -1.355 | Destabilizing | 0.489 | N | 0.593 | neutral | N | 0.482220294 | None | None | N |
T/C | 0.5492 | ambiguous | 0.4867 | ambiguous | -0.922 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
T/D | 0.7267 | likely_pathogenic | 0.7087 | pathogenic | -1.267 | Destabilizing | 0.985 | D | 0.734 | prob.delet. | None | None | None | None | N |
T/E | 0.6056 | likely_pathogenic | 0.5704 | pathogenic | -1.065 | Destabilizing | 0.995 | D | 0.729 | prob.delet. | None | None | None | None | N |
T/F | 0.275 | likely_benign | 0.2412 | benign | -1.136 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
T/G | 0.4456 | ambiguous | 0.4348 | ambiguous | -1.751 | Destabilizing | 0.988 | D | 0.683 | prob.neutral | None | None | None | None | N |
T/H | 0.319 | likely_benign | 0.2941 | benign | -1.751 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
T/I | 0.1386 | likely_benign | 0.1038 | benign | -0.311 | Destabilizing | 0.998 | D | 0.763 | deleterious | N | 0.494076216 | None | None | N |
T/K | 0.3435 | ambiguous | 0.2923 | benign | -0.262 | Destabilizing | 0.997 | D | 0.731 | prob.delet. | None | None | None | None | N |
T/L | 0.1263 | likely_benign | 0.1041 | benign | -0.311 | Destabilizing | 0.989 | D | 0.663 | neutral | None | None | None | None | N |
T/M | 0.1051 | likely_benign | 0.1015 | benign | -0.311 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
T/N | 0.2526 | likely_benign | 0.2491 | benign | -0.92 | Destabilizing | 0.98 | D | 0.72 | prob.delet. | N | 0.512859397 | None | None | N |
T/P | 0.821 | likely_pathogenic | 0.7514 | pathogenic | -0.63 | Destabilizing | 0.99 | D | 0.767 | deleterious | D | 0.524469192 | None | None | N |
T/Q | 0.3639 | ambiguous | 0.3253 | benign | -0.758 | Destabilizing | 0.997 | D | 0.781 | deleterious | None | None | None | None | N |
T/R | 0.2299 | likely_benign | 0.1927 | benign | -0.465 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
T/S | 0.1551 | likely_benign | 0.1519 | benign | -1.247 | Destabilizing | 0.058 | N | 0.429 | neutral | N | 0.492035988 | None | None | N |
T/V | 0.137 | likely_benign | 0.1143 | benign | -0.63 | Destabilizing | 0.984 | D | 0.591 | neutral | None | None | None | None | N |
T/W | 0.6472 | likely_pathogenic | 0.6142 | pathogenic | -1.17 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
T/Y | 0.3222 | likely_benign | 0.3083 | benign | -0.81 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.