Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8653 | 26182;26183;26184 | chr2:178715229;178715228;178715227 | chr2:179579956;179579955;179579954 |
N2AB | 8336 | 25231;25232;25233 | chr2:178715229;178715228;178715227 | chr2:179579956;179579955;179579954 |
N2A | 7409 | 22450;22451;22452 | chr2:178715229;178715228;178715227 | chr2:179579956;179579955;179579954 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs879235743 | -0.246 | 0.345 | N | 0.487 | 0.101 | 0.277730125212 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
E/D | rs879235743 | -0.246 | 0.345 | N | 0.487 | 0.101 | 0.277730125212 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/D | rs879235743 | -0.246 | 0.345 | N | 0.487 | 0.101 | 0.277730125212 | gnomAD-4.0.0 | 2.56592E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.79035E-06 | 0 | 0 |
E/G | None | None | 0.979 | N | 0.499 | 0.504 | 0.570754586423 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
E/K | None | None | 0.791 | D | 0.499 | 0.275 | 0.396494342077 | gnomAD-4.0.0 | 1.60023E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86885E-06 | 0 | 0 |
E/Q | rs566740788 | 0.151 | 0.144 | D | 0.294 | 0.129 | 0.272639205421 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | I | None | 6.48E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/Q | rs566740788 | 0.151 | 0.144 | D | 0.294 | 0.129 | 0.272639205421 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs566740788 | 0.151 | 0.144 | D | 0.294 | 0.129 | 0.272639205421 | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
E/Q | rs566740788 | 0.151 | 0.144 | D | 0.294 | 0.129 | 0.272639205421 | gnomAD-4.0.0 | 2.57369E-06 | None | None | None | None | I | None | 3.39305E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1382 | likely_benign | 0.1333 | benign | -0.321 | Destabilizing | 0.804 | D | 0.501 | neutral | N | 0.517975448 | None | None | I |
E/C | 0.8058 | likely_pathogenic | 0.8065 | pathogenic | -0.002 | Destabilizing | 0.998 | D | 0.703 | prob.neutral | None | None | None | None | I |
E/D | 0.1578 | likely_benign | 0.1561 | benign | -0.357 | Destabilizing | 0.345 | N | 0.487 | neutral | N | 0.513993781 | None | None | I |
E/F | 0.6653 | likely_pathogenic | 0.648 | pathogenic | -0.247 | Destabilizing | 0.972 | D | 0.668 | neutral | None | None | None | None | I |
E/G | 0.1669 | likely_benign | 0.1555 | benign | -0.508 | Destabilizing | 0.979 | D | 0.499 | neutral | N | 0.495927134 | None | None | I |
E/H | 0.3852 | ambiguous | 0.3643 | ambiguous | 0.016 | Stabilizing | 0.995 | D | 0.474 | neutral | None | None | None | None | I |
E/I | 0.2988 | likely_benign | 0.301 | benign | 0.134 | Stabilizing | 0.892 | D | 0.638 | neutral | None | None | None | None | I |
E/K | 0.1266 | likely_benign | 0.1233 | benign | 0.383 | Stabilizing | 0.791 | D | 0.499 | neutral | D | 0.522573192 | None | None | I |
E/L | 0.3155 | likely_benign | 0.3101 | benign | 0.134 | Stabilizing | 0.033 | N | 0.395 | neutral | None | None | None | None | I |
E/M | 0.3772 | ambiguous | 0.3796 | ambiguous | 0.199 | Stabilizing | 0.918 | D | 0.611 | neutral | None | None | None | None | I |
E/N | 0.2581 | likely_benign | 0.2449 | benign | 0.08 | Stabilizing | 0.885 | D | 0.491 | neutral | None | None | None | None | I |
E/P | 0.503 | ambiguous | 0.4559 | ambiguous | 0.002 | Stabilizing | 0.833 | D | 0.539 | neutral | None | None | None | None | I |
E/Q | 0.1091 | likely_benign | 0.1013 | benign | 0.101 | Stabilizing | 0.144 | N | 0.294 | neutral | D | 0.529269878 | None | None | I |
E/R | 0.2082 | likely_benign | 0.1977 | benign | 0.575 | Stabilizing | 0.946 | D | 0.487 | neutral | None | None | None | None | I |
E/S | 0.1866 | likely_benign | 0.1734 | benign | -0.074 | Destabilizing | 0.844 | D | 0.481 | neutral | None | None | None | None | I |
E/T | 0.183 | likely_benign | 0.1801 | benign | 0.078 | Stabilizing | 0.963 | D | 0.488 | neutral | None | None | None | None | I |
E/V | 0.1762 | likely_benign | 0.1787 | benign | 0.002 | Stabilizing | 0.558 | D | 0.499 | neutral | N | 0.494405155 | None | None | I |
E/W | 0.8432 | likely_pathogenic | 0.8354 | pathogenic | -0.114 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
E/Y | 0.5302 | ambiguous | 0.5108 | ambiguous | -0.002 | Destabilizing | 0.998 | D | 0.625 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.