Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8655 | 26188;26189;26190 | chr2:178715223;178715222;178715221 | chr2:179579950;179579949;179579948 |
N2AB | 8338 | 25237;25238;25239 | chr2:178715223;178715222;178715221 | chr2:179579950;179579949;179579948 |
N2A | 7411 | 22456;22457;22458 | chr2:178715223;178715222;178715221 | chr2:179579950;179579949;179579948 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs759578526 | -0.495 | 1.0 | D | 0.723 | 0.568 | 0.858636765436 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
L/P | rs759578526 | -0.495 | 1.0 | D | 0.723 | 0.568 | 0.858636765436 | gnomAD-4.0.0 | 1.36866E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79914E-06 | 0 | 0 |
L/R | None | None | 1.0 | N | 0.717 | 0.43 | 0.832531937271 | gnomAD-4.0.0 | 6.84328E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99569E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2075 | likely_benign | 0.2475 | benign | -0.731 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | I |
L/C | 0.5131 | ambiguous | 0.5957 | pathogenic | -0.704 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | I |
L/D | 0.6663 | likely_pathogenic | 0.7117 | pathogenic | -0.018 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
L/E | 0.3207 | likely_benign | 0.3614 | ambiguous | -0.082 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | I |
L/F | 0.1459 | likely_benign | 0.1652 | benign | -0.558 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | I |
L/G | 0.4245 | ambiguous | 0.4898 | ambiguous | -0.936 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
L/H | 0.2611 | likely_benign | 0.2992 | benign | -0.161 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
L/I | 0.0932 | likely_benign | 0.0937 | benign | -0.299 | Destabilizing | 0.994 | D | 0.611 | neutral | None | None | None | None | I |
L/K | 0.2476 | likely_benign | 0.2772 | benign | -0.416 | Destabilizing | 0.998 | D | 0.697 | prob.neutral | None | None | None | None | I |
L/M | 0.1052 | likely_benign | 0.1129 | benign | -0.396 | Destabilizing | 0.999 | D | 0.633 | neutral | D | 0.527170935 | None | None | I |
L/N | 0.3714 | ambiguous | 0.3888 | ambiguous | -0.248 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
L/P | 0.2914 | likely_benign | 0.3212 | benign | -0.409 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | D | 0.533904906 | None | None | I |
L/Q | 0.1278 | likely_benign | 0.1455 | benign | -0.428 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.48498154 | None | None | I |
L/R | 0.1808 | likely_benign | 0.2083 | benign | 0.105 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.511777408 | None | None | I |
L/S | 0.2105 | likely_benign | 0.2624 | benign | -0.78 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
L/T | 0.1901 | likely_benign | 0.2203 | benign | -0.728 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
L/V | 0.0818 | likely_benign | 0.0861 | benign | -0.409 | Destabilizing | 0.994 | D | 0.641 | neutral | N | 0.466487835 | None | None | I |
L/W | 0.2432 | likely_benign | 0.2969 | benign | -0.577 | Destabilizing | 0.904 | D | 0.579 | neutral | None | None | None | None | I |
L/Y | 0.3739 | ambiguous | 0.4129 | ambiguous | -0.335 | Destabilizing | 0.993 | D | 0.65 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.