Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC865526188;26189;26190 chr2:178715223;178715222;178715221chr2:179579950;179579949;179579948
N2AB833825237;25238;25239 chr2:178715223;178715222;178715221chr2:179579950;179579949;179579948
N2A741122456;22457;22458 chr2:178715223;178715222;178715221chr2:179579950;179579949;179579948
N2BNoneNone chr2:Nonechr2:None
Novex-1NoneNone chr2:Nonechr2:None
Novex-2NoneNone chr2:Nonechr2:None
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTG
  • RefSeq wild type template codon: GAC
  • Domain: Ig-72
  • Domain position: 13
  • Structural Position: 18
  • Q(SASA): 0.8769
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/P rs759578526 -0.495 1.0 D 0.723 0.568 0.858636765436 gnomAD-2.1.1 4.02E-06 None None None None I None 0 0 None 0 0 None 0 None 0 8.88E-06 0
L/P rs759578526 -0.495 1.0 D 0.723 0.568 0.858636765436 gnomAD-4.0.0 1.36866E-06 None None None None I None 0 0 None 0 0 None 0 0 1.79914E-06 0 0
L/R None None 1.0 N 0.717 0.43 0.832531937271 gnomAD-4.0.0 6.84328E-07 None None None None I None 0 0 None 0 0 None 0 0 8.99569E-07 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.2075 likely_benign 0.2475 benign -0.731 Destabilizing 0.999 D 0.663 neutral None None None None I
L/C 0.5131 ambiguous 0.5957 pathogenic -0.704 Destabilizing 1.0 D 0.639 neutral None None None None I
L/D 0.6663 likely_pathogenic 0.7117 pathogenic -0.018 Destabilizing 1.0 D 0.723 prob.delet. None None None None I
L/E 0.3207 likely_benign 0.3614 ambiguous -0.082 Destabilizing 1.0 D 0.721 prob.delet. None None None None I
L/F 0.1459 likely_benign 0.1652 benign -0.558 Destabilizing 0.999 D 0.705 prob.neutral None None None None I
L/G 0.4245 ambiguous 0.4898 ambiguous -0.936 Destabilizing 1.0 D 0.711 prob.delet. None None None None I
L/H 0.2611 likely_benign 0.2992 benign -0.161 Destabilizing 1.0 D 0.716 prob.delet. None None None None I
L/I 0.0932 likely_benign 0.0937 benign -0.299 Destabilizing 0.994 D 0.611 neutral None None None None I
L/K 0.2476 likely_benign 0.2772 benign -0.416 Destabilizing 0.998 D 0.697 prob.neutral None None None None I
L/M 0.1052 likely_benign 0.1129 benign -0.396 Destabilizing 0.999 D 0.633 neutral D 0.527170935 None None I
L/N 0.3714 ambiguous 0.3888 ambiguous -0.248 Destabilizing 1.0 D 0.723 prob.delet. None None None None I
L/P 0.2914 likely_benign 0.3212 benign -0.409 Destabilizing 1.0 D 0.723 prob.delet. D 0.533904906 None None I
L/Q 0.1278 likely_benign 0.1455 benign -0.428 Destabilizing 1.0 D 0.709 prob.delet. N 0.48498154 None None I
L/R 0.1808 likely_benign 0.2083 benign 0.105 Stabilizing 1.0 D 0.717 prob.delet. N 0.511777408 None None I
L/S 0.2105 likely_benign 0.2624 benign -0.78 Destabilizing 1.0 D 0.703 prob.neutral None None None None I
L/T 0.1901 likely_benign 0.2203 benign -0.728 Destabilizing 1.0 D 0.665 neutral None None None None I
L/V 0.0818 likely_benign 0.0861 benign -0.409 Destabilizing 0.994 D 0.641 neutral N 0.466487835 None None I
L/W 0.2432 likely_benign 0.2969 benign -0.577 Destabilizing 0.904 D 0.579 neutral None None None None I
L/Y 0.3739 ambiguous 0.4129 ambiguous -0.335 Destabilizing 0.993 D 0.65 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.