Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8673 | 26242;26243;26244 | chr2:178715169;178715168;178715167 | chr2:179579896;179579895;179579894 |
N2AB | 8356 | 25291;25292;25293 | chr2:178715169;178715168;178715167 | chr2:179579896;179579895;179579894 |
N2A | 7429 | 22510;22511;22512 | chr2:178715169;178715168;178715167 | chr2:179579896;179579895;179579894 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs370266918 | 0.375 | None | N | 0.055 | 0.107 | 0.0482279557977 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65618E-04 |
H/Q | rs370266918 | 0.375 | None | N | 0.055 | 0.107 | 0.0482279557977 | gnomAD-4.0.0 | 1.36848E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73491E-04 | 8.99522E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1156 | likely_benign | 0.1173 | benign | 0.435 | Stabilizing | 0.002 | N | 0.273 | neutral | None | None | None | None | I |
H/C | 0.1368 | likely_benign | 0.1421 | benign | 0.746 | Stabilizing | 0.497 | N | 0.399 | neutral | None | None | None | None | I |
H/D | 0.1068 | likely_benign | 0.1166 | benign | -0.027 | Destabilizing | 0.001 | N | 0.251 | neutral | N | 0.416808377 | None | None | I |
H/E | 0.1121 | likely_benign | 0.1163 | benign | -0.009 | Destabilizing | None | N | 0.046 | neutral | None | None | None | None | I |
H/F | 0.2118 | likely_benign | 0.2021 | benign | 1.056 | Stabilizing | 0.044 | N | 0.429 | neutral | None | None | None | None | I |
H/G | 0.1782 | likely_benign | 0.1775 | benign | 0.172 | Stabilizing | 0.008 | N | 0.27 | neutral | None | None | None | None | I |
H/I | 0.1282 | likely_benign | 0.1319 | benign | 1.097 | Stabilizing | 0.009 | N | 0.298 | neutral | None | None | None | None | I |
H/K | 0.1168 | likely_benign | 0.116 | benign | 0.351 | Stabilizing | 0.002 | N | 0.275 | neutral | None | None | None | None | I |
H/L | 0.0646 | likely_benign | 0.0699 | benign | 1.097 | Stabilizing | None | N | 0.261 | neutral | N | 0.434087415 | None | None | I |
H/M | 0.2223 | likely_benign | 0.2291 | benign | 0.788 | Stabilizing | 0.044 | N | 0.522 | neutral | None | None | None | None | I |
H/N | 0.0632 | likely_benign | 0.0683 | benign | 0.303 | Stabilizing | 0.006 | N | 0.153 | neutral | N | 0.425755934 | None | None | I |
H/P | 0.2614 | likely_benign | 0.2746 | benign | 0.902 | Stabilizing | 0.028 | N | 0.313 | neutral | D | 0.522245118 | None | None | I |
H/Q | 0.0736 | likely_benign | 0.0735 | benign | 0.397 | Stabilizing | None | N | 0.055 | neutral | N | 0.35764543 | None | None | I |
H/R | 0.071 | likely_benign | 0.0695 | benign | -0.243 | Destabilizing | 0.003 | N | 0.142 | neutral | N | 0.423966422 | None | None | I |
H/S | 0.1017 | likely_benign | 0.1029 | benign | 0.43 | Stabilizing | 0.002 | N | 0.233 | neutral | None | None | None | None | I |
H/T | 0.0971 | likely_benign | 0.0988 | benign | 0.546 | Stabilizing | 0.008 | N | 0.262 | neutral | None | None | None | None | I |
H/V | 0.1031 | likely_benign | 0.1062 | benign | 0.902 | Stabilizing | 0.004 | N | 0.285 | neutral | None | None | None | None | I |
H/W | 0.2846 | likely_benign | 0.2884 | benign | 0.999 | Stabilizing | 0.497 | N | 0.405 | neutral | None | None | None | None | I |
H/Y | 0.0824 | likely_benign | 0.0849 | benign | 1.278 | Stabilizing | 0.028 | N | 0.339 | neutral | N | 0.492789002 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.