Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8679 | 26260;26261;26262 | chr2:178715151;178715150;178715149 | chr2:179579878;179579877;179579876 |
N2AB | 8362 | 25309;25310;25311 | chr2:178715151;178715150;178715149 | chr2:179579878;179579877;179579876 |
N2A | 7435 | 22528;22529;22530 | chr2:178715151;178715150;178715149 | chr2:179579878;179579877;179579876 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | rs373587266 | None | 0.999 | N | 0.59 | 0.453 | 0.37262878642 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/A | rs373587266 | None | 0.999 | N | 0.59 | 0.453 | 0.37262878642 | gnomAD-4.0.0 | 6.56564E-06 | None | None | None | None | N | None | 2.40535E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/V | None | None | 1.0 | N | 0.697 | 0.468 | 0.549460442827 | gnomAD-4.0.0 | 1.5914E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85876E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.461 | ambiguous | 0.5664 | pathogenic | -0.062 | Destabilizing | 0.999 | D | 0.59 | neutral | N | 0.480791944 | None | None | N |
D/C | 0.8788 | likely_pathogenic | 0.9147 | pathogenic | 0.03 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
D/E | 0.2415 | likely_benign | 0.2916 | benign | -0.242 | Destabilizing | 0.946 | D | 0.413 | neutral | N | 0.510757822 | None | None | N |
D/F | 0.8448 | likely_pathogenic | 0.8917 | pathogenic | -0.121 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
D/G | 0.1902 | likely_benign | 0.2389 | benign | -0.219 | Destabilizing | 0.991 | D | 0.549 | neutral | N | 0.461518692 | None | None | N |
D/H | 0.6724 | likely_pathogenic | 0.7528 | pathogenic | 0.197 | Stabilizing | 1.0 | D | 0.616 | neutral | N | 0.505986543 | None | None | N |
D/I | 0.8285 | likely_pathogenic | 0.8898 | pathogenic | 0.29 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
D/K | 0.775 | likely_pathogenic | 0.8428 | pathogenic | 0.386 | Stabilizing | 1.0 | D | 0.585 | neutral | None | None | None | None | N |
D/L | 0.7454 | likely_pathogenic | 0.8077 | pathogenic | 0.29 | Stabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
D/M | 0.885 | likely_pathogenic | 0.9184 | pathogenic | 0.242 | Stabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
D/N | 0.156 | likely_benign | 0.1975 | benign | 0.202 | Stabilizing | 0.483 | N | 0.293 | neutral | N | 0.476967748 | None | None | N |
D/P | 0.979 | likely_pathogenic | 0.9845 | pathogenic | 0.194 | Stabilizing | 0.997 | D | 0.624 | neutral | None | None | None | None | N |
D/Q | 0.6548 | likely_pathogenic | 0.734 | pathogenic | 0.212 | Stabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
D/R | 0.7922 | likely_pathogenic | 0.8529 | pathogenic | 0.56 | Stabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
D/S | 0.3191 | likely_benign | 0.4101 | ambiguous | 0.09 | Stabilizing | 0.995 | D | 0.507 | neutral | None | None | None | None | N |
D/T | 0.7147 | likely_pathogenic | 0.7926 | pathogenic | 0.208 | Stabilizing | 0.997 | D | 0.579 | neutral | None | None | None | None | N |
D/V | 0.6381 | likely_pathogenic | 0.734 | pathogenic | 0.194 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | N | 0.47826073 | None | None | N |
D/W | 0.9589 | likely_pathogenic | 0.9724 | pathogenic | -0.06 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
D/Y | 0.4462 | ambiguous | 0.5517 | ambiguous | 0.104 | Stabilizing | 1.0 | D | 0.681 | prob.neutral | N | 0.517760922 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.