Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8689 | 26290;26291;26292 | chr2:178715121;178715120;178715119 | chr2:179579848;179579847;179579846 |
N2AB | 8372 | 25339;25340;25341 | chr2:178715121;178715120;178715119 | chr2:179579848;179579847;179579846 |
N2A | 7445 | 22558;22559;22560 | chr2:178715121;178715120;178715119 | chr2:179579848;179579847;179579846 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.755 | 0.578 | 0.762425462539 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9245 | likely_pathogenic | 0.9145 | pathogenic | -2.882 | Highly Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
Y/C | 0.3987 | ambiguous | 0.3863 | ambiguous | -1.855 | Destabilizing | 1.0 | D | 0.755 | deleterious | D | 0.524805037 | None | None | N |
Y/D | 0.9395 | likely_pathogenic | 0.9211 | pathogenic | -2.538 | Highly Destabilizing | 1.0 | D | 0.798 | deleterious | D | 0.548024626 | None | None | N |
Y/E | 0.9639 | likely_pathogenic | 0.955 | pathogenic | -2.346 | Highly Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
Y/F | 0.149 | likely_benign | 0.1358 | benign | -1.035 | Destabilizing | 0.113 | N | 0.322 | neutral | N | 0.479667776 | None | None | N |
Y/G | 0.8868 | likely_pathogenic | 0.8778 | pathogenic | -3.306 | Highly Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
Y/H | 0.5253 | ambiguous | 0.4773 | ambiguous | -1.793 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | D | 0.529365878 | None | None | N |
Y/I | 0.7342 | likely_pathogenic | 0.709 | pathogenic | -1.508 | Destabilizing | 0.969 | D | 0.709 | prob.delet. | None | None | None | None | N |
Y/K | 0.9594 | likely_pathogenic | 0.9477 | pathogenic | -2.134 | Highly Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
Y/L | 0.7422 | likely_pathogenic | 0.7354 | pathogenic | -1.508 | Destabilizing | 0.898 | D | 0.491 | neutral | None | None | None | None | N |
Y/M | 0.8116 | likely_pathogenic | 0.8089 | pathogenic | -1.296 | Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
Y/N | 0.6269 | likely_pathogenic | 0.5957 | pathogenic | -2.825 | Highly Destabilizing | 1.0 | D | 0.78 | deleterious | D | 0.525058526 | None | None | N |
Y/P | 0.9927 | likely_pathogenic | 0.9919 | pathogenic | -1.975 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
Y/Q | 0.8855 | likely_pathogenic | 0.8676 | pathogenic | -2.562 | Highly Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
Y/R | 0.8943 | likely_pathogenic | 0.8706 | pathogenic | -1.884 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
Y/S | 0.7939 | likely_pathogenic | 0.7687 | pathogenic | -3.308 | Highly Destabilizing | 1.0 | D | 0.741 | deleterious | N | 0.501420863 | None | None | N |
Y/T | 0.8824 | likely_pathogenic | 0.8665 | pathogenic | -2.994 | Highly Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
Y/V | 0.6509 | likely_pathogenic | 0.6311 | pathogenic | -1.975 | Destabilizing | 0.998 | D | 0.641 | neutral | None | None | None | None | N |
Y/W | 0.575 | likely_pathogenic | 0.5564 | ambiguous | -0.394 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.