Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8690 | 26293;26294;26295 | chr2:178715118;178715117;178715116 | chr2:179579845;179579844;179579843 |
N2AB | 8373 | 25342;25343;25344 | chr2:178715118;178715117;178715116 | chr2:179579845;179579844;179579843 |
N2A | 7446 | 22561;22562;22563 | chr2:178715118;178715117;178715116 | chr2:179579845;179579844;179579843 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1060500411 | 0.24 | 0.991 | N | 0.492 | 0.384 | 0.397391247328 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.64E-05 | 0 | 0 |
K/E | rs1060500411 | 0.24 | 0.991 | N | 0.492 | 0.384 | 0.397391247328 | gnomAD-4.0.0 | 3.18278E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.76464E-05 | 0 | 0 | 0 | 0 |
K/R | rs755911258 | -0.419 | 0.34 | N | 0.256 | 0.098 | 0.235038932564 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
K/R | rs755911258 | -0.419 | 0.34 | N | 0.256 | 0.098 | 0.235038932564 | gnomAD-4.0.0 | 1.36847E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79904E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8989 | likely_pathogenic | 0.8876 | pathogenic | -0.799 | Destabilizing | 0.998 | D | 0.491 | neutral | None | None | None | None | N |
K/C | 0.9465 | likely_pathogenic | 0.94 | pathogenic | -0.778 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
K/D | 0.9526 | likely_pathogenic | 0.9535 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.535 | neutral | None | None | None | None | N |
K/E | 0.7328 | likely_pathogenic | 0.7021 | pathogenic | -0.185 | Destabilizing | 0.991 | D | 0.492 | neutral | N | 0.506681019 | None | None | N |
K/F | 0.9749 | likely_pathogenic | 0.9665 | pathogenic | -0.37 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
K/G | 0.936 | likely_pathogenic | 0.9342 | pathogenic | -1.208 | Destabilizing | 0.615 | D | 0.313 | neutral | None | None | None | None | N |
K/H | 0.6033 | likely_pathogenic | 0.5944 | pathogenic | -1.543 | Destabilizing | 1.0 | D | 0.598 | neutral | None | None | None | None | N |
K/I | 0.8123 | likely_pathogenic | 0.7504 | pathogenic | 0.284 | Stabilizing | 0.997 | D | 0.665 | neutral | None | None | None | None | N |
K/L | 0.7999 | likely_pathogenic | 0.7557 | pathogenic | 0.284 | Stabilizing | 0.991 | D | 0.489 | neutral | None | None | None | None | N |
K/M | 0.681 | likely_pathogenic | 0.6413 | pathogenic | 0.214 | Stabilizing | 1.0 | D | 0.594 | neutral | N | 0.506536197 | None | None | N |
K/N | 0.9017 | likely_pathogenic | 0.8909 | pathogenic | -0.714 | Destabilizing | 1.0 | D | 0.481 | neutral | N | 0.512068196 | None | None | N |
K/P | 0.9875 | likely_pathogenic | 0.989 | pathogenic | -0.047 | Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | N |
K/Q | 0.4029 | ambiguous | 0.3946 | ambiguous | -0.732 | Destabilizing | 0.994 | D | 0.516 | neutral | N | 0.503622072 | None | None | N |
K/R | 0.1083 | likely_benign | 0.107 | benign | -0.791 | Destabilizing | 0.34 | N | 0.256 | neutral | N | 0.474992675 | None | None | N |
K/S | 0.9047 | likely_pathogenic | 0.8974 | pathogenic | -1.415 | Destabilizing | 0.998 | D | 0.484 | neutral | None | None | None | None | N |
K/T | 0.6723 | likely_pathogenic | 0.6508 | pathogenic | -1.041 | Destabilizing | 0.999 | D | 0.519 | neutral | N | 0.508798605 | None | None | N |
K/V | 0.7751 | likely_pathogenic | 0.7233 | pathogenic | -0.047 | Destabilizing | 0.993 | D | 0.602 | neutral | None | None | None | None | N |
K/W | 0.9489 | likely_pathogenic | 0.9433 | pathogenic | -0.228 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
K/Y | 0.9156 | likely_pathogenic | 0.9044 | pathogenic | 0.062 | Stabilizing | 0.998 | D | 0.645 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.