Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8699 | 26320;26321;26322 | chr2:178715091;178715090;178715089 | chr2:179579818;179579817;179579816 |
N2AB | 8382 | 25369;25370;25371 | chr2:178715091;178715090;178715089 | chr2:179579818;179579817;179579816 |
N2A | 7455 | 22588;22589;22590 | chr2:178715091;178715090;178715089 | chr2:179579818;179579817;179579816 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | rs1164228016 | -1.397 | 0.998 | N | 0.573 | 0.462 | 0.457286136841 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
S/G | rs1164228016 | -1.397 | 0.998 | N | 0.573 | 0.462 | 0.457286136841 | gnomAD-4.0.0 | 1.59143E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
S/N | rs1311071697 | None | 0.973 | D | 0.59 | 0.22 | None | gnomAD-4.0.0 | 1.23162E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.61914E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1121 | likely_benign | 0.1053 | benign | -0.643 | Destabilizing | 0.939 | D | 0.507 | neutral | None | None | None | None | N |
S/C | 0.2095 | likely_benign | 0.2037 | benign | -0.516 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | N | 0.507866097 | None | None | N |
S/D | 0.7619 | likely_pathogenic | 0.6961 | pathogenic | -1.812 | Destabilizing | 0.998 | D | 0.589 | neutral | None | None | None | None | N |
S/E | 0.8178 | likely_pathogenic | 0.7877 | pathogenic | -1.577 | Destabilizing | 0.998 | D | 0.609 | neutral | None | None | None | None | N |
S/F | 0.464 | ambiguous | 0.4199 | ambiguous | -0.229 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
S/G | 0.1623 | likely_benign | 0.1249 | benign | -1.043 | Destabilizing | 0.998 | D | 0.573 | neutral | N | 0.495749323 | None | None | N |
S/H | 0.5395 | ambiguous | 0.4994 | ambiguous | -1.458 | Destabilizing | 1.0 | D | 0.684 | prob.neutral | None | None | None | None | N |
S/I | 0.4503 | ambiguous | 0.3694 | ambiguous | 0.395 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.495015308 | None | None | N |
S/K | 0.8828 | likely_pathogenic | 0.8452 | pathogenic | -0.33 | Destabilizing | 1.0 | D | 0.598 | neutral | None | None | None | None | N |
S/L | 0.2611 | likely_benign | 0.2355 | benign | 0.395 | Stabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
S/M | 0.3821 | ambiguous | 0.3503 | ambiguous | 0.171 | Stabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
S/N | 0.3313 | likely_benign | 0.2728 | benign | -1.21 | Destabilizing | 0.973 | D | 0.59 | neutral | D | 0.532944901 | None | None | N |
S/P | 0.9838 | likely_pathogenic | 0.9732 | pathogenic | 0.081 | Stabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
S/Q | 0.7263 | likely_pathogenic | 0.6927 | pathogenic | -0.716 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
S/R | 0.7779 | likely_pathogenic | 0.7178 | pathogenic | -0.971 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | D | 0.528576444 | None | None | N |
S/T | 0.1301 | likely_benign | 0.119 | benign | -0.756 | Destabilizing | 0.016 | N | 0.317 | neutral | N | 0.457596206 | None | None | N |
S/V | 0.3641 | ambiguous | 0.3184 | benign | 0.081 | Stabilizing | 1.0 | D | 0.668 | neutral | None | None | None | None | N |
S/W | 0.615 | likely_pathogenic | 0.5708 | pathogenic | -0.797 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
S/Y | 0.3754 | ambiguous | 0.348 | ambiguous | -0.305 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.