Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8702 | 26329;26330;26331 | chr2:178715082;178715081;178715080 | chr2:179579809;179579808;179579807 |
N2AB | 8385 | 25378;25379;25380 | chr2:178715082;178715081;178715080 | chr2:179579809;179579808;179579807 |
N2A | 7458 | 22597;22598;22599 | chr2:178715082;178715081;178715080 | chr2:179579809;179579808;179579807 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1560608555 | None | 0.011 | D | 0.265 | 0.349 | 0.643072836008 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
I/V | rs1560608555 | None | 0.011 | D | 0.265 | 0.349 | 0.643072836008 | gnomAD-4.0.0 | 3.18287E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71772E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.92 | likely_pathogenic | 0.9359 | pathogenic | -3.151 | Highly Destabilizing | 0.993 | D | 0.698 | prob.neutral | None | None | None | None | N |
I/C | 0.9098 | likely_pathogenic | 0.9339 | pathogenic | -2.331 | Highly Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
I/D | 0.9959 | likely_pathogenic | 0.997 | pathogenic | -3.843 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
I/E | 0.9928 | likely_pathogenic | 0.9944 | pathogenic | -3.519 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
I/F | 0.3413 | ambiguous | 0.4443 | ambiguous | -1.868 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | D | 0.558791299 | None | None | N |
I/G | 0.9851 | likely_pathogenic | 0.9884 | pathogenic | -3.757 | Highly Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
I/H | 0.9597 | likely_pathogenic | 0.9723 | pathogenic | -3.365 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
I/K | 0.9753 | likely_pathogenic | 0.9819 | pathogenic | -2.529 | Highly Destabilizing | 0.999 | D | 0.858 | deleterious | None | None | None | None | N |
I/L | 0.1998 | likely_benign | 0.2364 | benign | -1.311 | Destabilizing | 0.083 | N | 0.402 | neutral | D | 0.543459508 | None | None | N |
I/M | 0.2712 | likely_benign | 0.3192 | benign | -1.468 | Destabilizing | 0.967 | D | 0.677 | prob.neutral | D | 0.624090287 | None | None | N |
I/N | 0.9397 | likely_pathogenic | 0.9495 | pathogenic | -3.246 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.651041028 | None | None | N |
I/P | 0.993 | likely_pathogenic | 0.9952 | pathogenic | -1.918 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
I/Q | 0.9768 | likely_pathogenic | 0.983 | pathogenic | -2.897 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
I/R | 0.9594 | likely_pathogenic | 0.9696 | pathogenic | -2.47 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
I/S | 0.9283 | likely_pathogenic | 0.9403 | pathogenic | -3.799 | Highly Destabilizing | 0.999 | D | 0.827 | deleterious | D | 0.635021667 | None | None | N |
I/T | 0.9271 | likely_pathogenic | 0.9363 | pathogenic | -3.318 | Highly Destabilizing | 0.984 | D | 0.76 | deleterious | D | 0.65063742 | None | None | N |
I/V | 0.1122 | likely_benign | 0.1139 | benign | -1.918 | Destabilizing | 0.011 | N | 0.265 | neutral | D | 0.543398788 | None | None | N |
I/W | 0.9691 | likely_pathogenic | 0.9825 | pathogenic | -2.293 | Highly Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
I/Y | 0.8584 | likely_pathogenic | 0.8995 | pathogenic | -2.146 | Highly Destabilizing | 0.989 | D | 0.768 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.