Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8703 | 26332;26333;26334 | chr2:178715079;178715078;178715077 | chr2:179579806;179579805;179579804 |
N2AB | 8386 | 25381;25382;25383 | chr2:178715079;178715078;178715077 | chr2:179579806;179579805;179579804 |
N2A | 7459 | 22600;22601;22602 | chr2:178715079;178715078;178715077 | chr2:179579806;179579805;179579804 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | N | 0.735 | 0.551 | 0.871880940535 | gnomAD-4.0.0 | 1.5915E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85897E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.3115 | likely_benign | 0.3953 | ambiguous | -2.131 | Highly Destabilizing | 0.999 | D | 0.515 | neutral | None | None | None | None | N |
L/C | 0.5806 | likely_pathogenic | 0.6367 | pathogenic | -1.363 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
L/D | 0.7817 | likely_pathogenic | 0.8607 | pathogenic | -1.966 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
L/E | 0.4591 | ambiguous | 0.5749 | pathogenic | -1.936 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
L/F | 0.1316 | likely_benign | 0.1664 | benign | -1.537 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
L/G | 0.5474 | ambiguous | 0.6422 | pathogenic | -2.498 | Highly Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
L/H | 0.2379 | likely_benign | 0.3362 | benign | -1.695 | Destabilizing | 0.867 | D | 0.497 | neutral | None | None | None | None | N |
L/I | 0.1007 | likely_benign | 0.1091 | benign | -1.161 | Destabilizing | 0.271 | N | 0.235 | neutral | None | None | None | None | N |
L/K | 0.3418 | ambiguous | 0.4494 | ambiguous | -1.512 | Destabilizing | 0.995 | D | 0.693 | prob.neutral | None | None | None | None | N |
L/M | 0.1225 | likely_benign | 0.1279 | benign | -0.858 | Destabilizing | 0.998 | D | 0.618 | neutral | N | 0.50497558 | None | None | N |
L/N | 0.4004 | ambiguous | 0.5007 | ambiguous | -1.378 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
L/P | 0.5084 | ambiguous | 0.6583 | pathogenic | -1.457 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | N | 0.516319223 | None | None | N |
L/Q | 0.1498 | likely_benign | 0.2126 | benign | -1.57 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.515220358 | None | None | N |
L/R | 0.2133 | likely_benign | 0.3133 | benign | -0.867 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | N | 0.495615877 | None | None | N |
L/S | 0.2743 | likely_benign | 0.3869 | ambiguous | -2.01 | Highly Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
L/T | 0.2506 | likely_benign | 0.3105 | benign | -1.865 | Destabilizing | 1.0 | D | 0.615 | neutral | None | None | None | None | N |
L/V | 0.1132 | likely_benign | 0.1304 | benign | -1.457 | Destabilizing | 0.851 | D | 0.485 | neutral | D | 0.524477346 | None | None | N |
L/W | 0.2337 | likely_benign | 0.316 | benign | -1.651 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
L/Y | 0.3748 | ambiguous | 0.4487 | ambiguous | -1.45 | Destabilizing | 0.994 | D | 0.687 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.