Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8729 | 26410;26411;26412 | chr2:178715001;178715000;178714999 | chr2:179579728;179579727;179579726 |
N2AB | 8412 | 25459;25460;25461 | chr2:178715001;178715000;178714999 | chr2:179579728;179579727;179579726 |
N2A | 7485 | 22678;22679;22680 | chr2:178715001;178715000;178714999 | chr2:179579728;179579727;179579726 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs1429923693 | -0.737 | 0.062 | N | 0.408 | 0.141 | 0.316198179892 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.36E-05 | None | 0 | 0 | 0 |
S/F | rs1429923693 | -0.737 | 0.062 | N | 0.408 | 0.141 | 0.316198179892 | gnomAD-4.0.0 | 1.60083E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4497E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0709 | likely_benign | 0.0704 | benign | -0.745 | Destabilizing | 0.001 | N | 0.201 | neutral | N | 0.456035116 | None | None | N |
S/C | 0.0947 | likely_benign | 0.1011 | benign | -0.503 | Destabilizing | 0.985 | D | 0.526 | neutral | N | 0.468453998 | None | None | N |
S/D | 0.2277 | likely_benign | 0.2596 | benign | -0.04 | Destabilizing | 0.762 | D | 0.537 | neutral | None | None | None | None | N |
S/E | 0.2872 | likely_benign | 0.3109 | benign | 0.021 | Stabilizing | 0.818 | D | 0.523 | neutral | None | None | None | None | N |
S/F | 0.0848 | likely_benign | 0.0885 | benign | -0.773 | Destabilizing | 0.062 | N | 0.408 | neutral | N | 0.485837948 | None | None | N |
S/G | 0.0933 | likely_benign | 0.0976 | benign | -1.055 | Destabilizing | 0.749 | D | 0.533 | neutral | None | None | None | None | N |
S/H | 0.1632 | likely_benign | 0.1618 | benign | -1.446 | Destabilizing | 0.999 | D | 0.525 | neutral | None | None | None | None | N |
S/I | 0.0928 | likely_benign | 0.0925 | benign | -0.013 | Destabilizing | 0.036 | N | 0.419 | neutral | None | None | None | None | N |
S/K | 0.3002 | likely_benign | 0.316 | benign | -0.381 | Destabilizing | 0.923 | D | 0.525 | neutral | None | None | None | None | N |
S/L | 0.0733 | likely_benign | 0.0718 | benign | -0.013 | Destabilizing | 0.016 | N | 0.388 | neutral | None | None | None | None | N |
S/M | 0.1403 | likely_benign | 0.1334 | benign | 0.055 | Stabilizing | 0.977 | D | 0.542 | neutral | None | None | None | None | N |
S/N | 0.0861 | likely_benign | 0.0905 | benign | -0.512 | Destabilizing | 0.273 | N | 0.545 | neutral | None | None | None | None | N |
S/P | 0.2233 | likely_benign | 0.2301 | benign | -0.221 | Destabilizing | 0.945 | D | 0.559 | neutral | N | 0.456679619 | None | None | N |
S/Q | 0.2635 | likely_benign | 0.2649 | benign | -0.524 | Destabilizing | 0.988 | D | 0.574 | neutral | None | None | None | None | N |
S/R | 0.2349 | likely_benign | 0.2553 | benign | -0.487 | Destabilizing | 0.977 | D | 0.561 | neutral | None | None | None | None | N |
S/T | 0.067 | likely_benign | 0.0661 | benign | -0.499 | Destabilizing | 0.004 | N | 0.344 | neutral | N | 0.411108115 | None | None | N |
S/V | 0.1036 | likely_benign | 0.104 | benign | -0.221 | Destabilizing | 0.242 | N | 0.467 | neutral | None | None | None | None | N |
S/W | 0.1668 | likely_benign | 0.1745 | benign | -0.77 | Destabilizing | 0.999 | D | 0.59 | neutral | None | None | None | None | N |
S/Y | 0.0828 | likely_benign | 0.0877 | benign | -0.454 | Destabilizing | 0.941 | D | 0.561 | neutral | N | 0.495804225 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.