Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8746 | 26461;26462;26463 | chr2:178714538;178714537;178714536 | chr2:179579265;179579264;179579263 |
N2AB | 8429 | 25510;25511;25512 | chr2:178714538;178714537;178714536 | chr2:179579265;179579264;179579263 |
N2A | 7502 | 22729;22730;22731 | chr2:178714538;178714537;178714536 | chr2:179579265;179579264;179579263 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.956 | N | 0.396 | 0.414 | 0.362758974969 | gnomAD-4.0.0 | 1.59661E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43724E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.075 | likely_benign | 0.0889 | benign | -0.279 | Destabilizing | 0.044 | N | 0.355 | neutral | D | 0.526938861 | None | None | N |
S/C | 0.1243 | likely_benign | 0.1528 | benign | -0.338 | Destabilizing | 0.996 | D | 0.461 | neutral | D | 0.526486877 | None | None | N |
S/D | 0.2622 | likely_benign | 0.3519 | ambiguous | 0.437 | Stabilizing | 0.801 | D | 0.349 | neutral | None | None | None | None | N |
S/E | 0.3149 | likely_benign | 0.409 | ambiguous | 0.351 | Stabilizing | 0.849 | D | 0.347 | neutral | None | None | None | None | N |
S/F | 0.1442 | likely_benign | 0.1981 | benign | -0.901 | Destabilizing | 0.988 | D | 0.558 | neutral | N | 0.514459008 | None | None | N |
S/G | 0.0983 | likely_benign | 0.1205 | benign | -0.382 | Destabilizing | 0.882 | D | 0.392 | neutral | None | None | None | None | N |
S/H | 0.2225 | likely_benign | 0.2757 | benign | -0.823 | Destabilizing | 0.999 | D | 0.463 | neutral | None | None | None | None | N |
S/I | 0.1306 | likely_benign | 0.1724 | benign | -0.14 | Destabilizing | 0.981 | D | 0.465 | neutral | None | None | None | None | N |
S/K | 0.3752 | ambiguous | 0.4965 | ambiguous | -0.312 | Destabilizing | 0.938 | D | 0.35 | neutral | None | None | None | None | N |
S/L | 0.0867 | likely_benign | 0.1073 | benign | -0.14 | Destabilizing | 0.883 | D | 0.465 | neutral | None | None | None | None | N |
S/M | 0.1736 | likely_benign | 0.1977 | benign | -0.076 | Destabilizing | 0.999 | D | 0.465 | neutral | None | None | None | None | N |
S/N | 0.1035 | likely_benign | 0.119 | benign | -0.13 | Destabilizing | 0.321 | N | 0.397 | neutral | None | None | None | None | N |
S/P | 0.1759 | likely_benign | 0.2773 | benign | -0.158 | Destabilizing | 0.956 | D | 0.396 | neutral | N | 0.503102703 | None | None | N |
S/Q | 0.3116 | likely_benign | 0.3807 | ambiguous | -0.315 | Destabilizing | 0.991 | D | 0.387 | neutral | None | None | None | None | N |
S/R | 0.2927 | likely_benign | 0.408 | ambiguous | -0.167 | Destabilizing | 0.981 | D | 0.403 | neutral | None | None | None | None | N |
S/T | 0.0635 | likely_benign | 0.0645 | benign | -0.235 | Destabilizing | 0.001 | N | 0.119 | neutral | N | 0.44093603 | None | None | N |
S/V | 0.1384 | likely_benign | 0.174 | benign | -0.158 | Destabilizing | 0.738 | D | 0.461 | neutral | None | None | None | None | N |
S/W | 0.2612 | likely_benign | 0.348 | ambiguous | -0.935 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
S/Y | 0.1357 | likely_benign | 0.1707 | benign | -0.622 | Destabilizing | 0.996 | D | 0.563 | neutral | N | 0.489771388 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.