Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8763 | 26512;26513;26514 | chr2:178714487;178714486;178714485 | chr2:179579214;179579213;179579212 |
N2AB | 8446 | 25561;25562;25563 | chr2:178714487;178714486;178714485 | chr2:179579214;179579213;179579212 |
N2A | 7519 | 22780;22781;22782 | chr2:178714487;178714486;178714485 | chr2:179579214;179579213;179579212 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs1453342840 | 0.161 | 0.567 | N | 0.478 | 0.254 | 0.365120060079 | gnomAD-2.1.1 | 6.37E-05 | None | None | None | None | I | None | 2.29621E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/A | rs1453342840 | 0.161 | 0.567 | N | 0.478 | 0.254 | 0.365120060079 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | I | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/A | rs1453342840 | 0.161 | 0.567 | N | 0.478 | 0.254 | 0.365120060079 | gnomAD-4.0.0 | 1.97174E-05 | None | None | None | None | I | None | 7.23903E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0931 | likely_benign | 0.0983 | benign | -0.269 | Destabilizing | 0.567 | D | 0.478 | neutral | N | 0.468432062 | None | None | I |
E/C | 0.7413 | likely_pathogenic | 0.7826 | pathogenic | -0.331 | Destabilizing | 0.993 | D | 0.643 | neutral | None | None | None | None | I |
E/D | 0.1173 | likely_benign | 0.128 | benign | -0.381 | Destabilizing | 0.145 | N | 0.533 | neutral | N | 0.50229392 | None | None | I |
E/F | 0.5166 | ambiguous | 0.577 | pathogenic | -0.104 | Destabilizing | 0.996 | D | 0.579 | neutral | None | None | None | None | I |
E/G | 0.0976 | likely_benign | 0.1124 | benign | -0.444 | Destabilizing | 0.813 | D | 0.451 | neutral | N | 0.512470841 | None | None | I |
E/H | 0.2821 | likely_benign | 0.3138 | benign | 0.438 | Stabilizing | 0.942 | D | 0.487 | neutral | None | None | None | None | I |
E/I | 0.2394 | likely_benign | 0.269 | benign | 0.154 | Stabilizing | 0.915 | D | 0.582 | neutral | None | None | None | None | I |
E/K | 0.0728 | likely_benign | 0.0831 | benign | 0.216 | Stabilizing | 0.549 | D | 0.545 | neutral | N | 0.501773845 | None | None | I |
E/L | 0.2052 | likely_benign | 0.2316 | benign | 0.154 | Stabilizing | 0.841 | D | 0.506 | neutral | None | None | None | None | I |
E/M | 0.2869 | likely_benign | 0.3207 | benign | -0.02 | Destabilizing | 0.879 | D | 0.517 | neutral | None | None | None | None | I |
E/N | 0.1759 | likely_benign | 0.2003 | benign | -0.15 | Destabilizing | 0.71 | D | 0.507 | neutral | None | None | None | None | I |
E/P | 0.2185 | likely_benign | 0.2159 | benign | 0.032 | Stabilizing | 0.002 | N | 0.297 | neutral | None | None | None | None | I |
E/Q | 0.0815 | likely_benign | 0.0836 | benign | -0.109 | Destabilizing | 0.023 | N | 0.188 | neutral | N | 0.423275776 | None | None | I |
E/R | 0.1302 | likely_benign | 0.148 | benign | 0.575 | Stabilizing | 0.85 | D | 0.514 | neutral | None | None | None | None | I |
E/S | 0.1151 | likely_benign | 0.1265 | benign | -0.303 | Destabilizing | 0.634 | D | 0.517 | neutral | None | None | None | None | I |
E/T | 0.1461 | likely_benign | 0.1677 | benign | -0.154 | Destabilizing | 0.894 | D | 0.433 | neutral | None | None | None | None | I |
E/V | 0.1445 | likely_benign | 0.1596 | benign | 0.032 | Stabilizing | 0.852 | D | 0.443 | neutral | N | 0.499330494 | None | None | I |
E/W | 0.7149 | likely_pathogenic | 0.7715 | pathogenic | 0.035 | Stabilizing | 0.999 | D | 0.654 | neutral | None | None | None | None | I |
E/Y | 0.3801 | ambiguous | 0.4377 | ambiguous | 0.135 | Stabilizing | 0.995 | D | 0.526 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.