Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8766 | 26521;26522;26523 | chr2:178714478;178714477;178714476 | chr2:179579205;179579204;179579203 |
N2AB | 8449 | 25570;25571;25572 | chr2:178714478;178714477;178714476 | chr2:179579205;179579204;179579203 |
N2A | 7522 | 22789;22790;22791 | chr2:178714478;178714477;178714476 | chr2:179579205;179579204;179579203 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs1368458893 | 0.385 | 0.044 | N | 0.339 | 0.313 | 0.593771126905 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/L | rs1368458893 | 0.385 | 0.044 | N | 0.339 | 0.313 | 0.593771126905 | gnomAD-4.0.0 | 1.5918E-06 | None | None | None | None | N | None | 0 | 2.28739E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0841 | likely_benign | 0.0946 | benign | -0.401 | Destabilizing | 0.106 | N | 0.369 | neutral | N | 0.499192363 | None | None | N |
S/C | 0.1972 | likely_benign | 0.2471 | benign | -0.391 | Destabilizing | 0.998 | D | 0.523 | neutral | None | None | None | None | N |
S/D | 0.406 | ambiguous | 0.4912 | ambiguous | 0.023 | Stabilizing | 0.913 | D | 0.468 | neutral | None | None | None | None | N |
S/E | 0.5152 | ambiguous | 0.5762 | pathogenic | 0.074 | Stabilizing | 0.936 | D | 0.433 | neutral | None | None | None | None | N |
S/F | 0.1564 | likely_benign | 0.1946 | benign | -0.613 | Destabilizing | 0.985 | D | 0.635 | neutral | None | None | None | None | N |
S/G | 0.1477 | likely_benign | 0.1891 | benign | -0.673 | Destabilizing | 0.951 | D | 0.447 | neutral | None | None | None | None | N |
S/H | 0.3531 | ambiguous | 0.3924 | ambiguous | -1.034 | Destabilizing | 0.999 | D | 0.527 | neutral | None | None | None | None | N |
S/I | 0.2082 | likely_benign | 0.2596 | benign | 0.218 | Stabilizing | 0.906 | D | 0.579 | neutral | None | None | None | None | N |
S/K | 0.6917 | likely_pathogenic | 0.7494 | pathogenic | -0.348 | Destabilizing | 0.951 | D | 0.418 | neutral | None | None | None | None | N |
S/L | 0.1051 | likely_benign | 0.1263 | benign | 0.218 | Stabilizing | 0.044 | N | 0.339 | neutral | N | 0.505802182 | None | None | N |
S/M | 0.2218 | likely_benign | 0.2458 | benign | 0.056 | Stabilizing | 0.985 | D | 0.559 | neutral | None | None | None | None | N |
S/N | 0.1877 | likely_benign | 0.2391 | benign | -0.533 | Destabilizing | 0.551 | D | 0.488 | neutral | None | None | None | None | N |
S/P | 0.604 | likely_pathogenic | 0.7734 | pathogenic | 0.047 | Stabilizing | 0.988 | D | 0.588 | neutral | N | 0.521450902 | None | None | N |
S/Q | 0.5279 | ambiguous | 0.5697 | pathogenic | -0.479 | Destabilizing | 0.998 | D | 0.513 | neutral | None | None | None | None | N |
S/R | 0.5931 | likely_pathogenic | 0.6677 | pathogenic | -0.398 | Destabilizing | 0.993 | D | 0.589 | neutral | None | None | None | None | N |
S/T | 0.0828 | likely_benign | 0.0895 | benign | -0.447 | Destabilizing | 0.003 | N | 0.169 | neutral | N | 0.459351219 | None | None | N |
S/V | 0.196 | likely_benign | 0.2307 | benign | 0.047 | Stabilizing | 0.783 | D | 0.545 | neutral | None | None | None | None | N |
S/W | 0.3132 | likely_benign | 0.3988 | ambiguous | -0.746 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
S/Y | 0.1496 | likely_benign | 0.1804 | benign | -0.367 | Destabilizing | 0.998 | D | 0.627 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.