Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8784 | 26575;26576;26577 | chr2:178714424;178714423;178714422 | chr2:179579151;179579150;179579149 |
N2AB | 8467 | 25624;25625;25626 | chr2:178714424;178714423;178714422 | chr2:179579151;179579150;179579149 |
N2A | 7540 | 22843;22844;22845 | chr2:178714424;178714423;178714422 | chr2:179579151;179579150;179579149 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/R | rs375067750 | -0.1 | 0.005 | N | 0.323 | 0.243 | 0.427254322456 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 1.66113E-04 |
W/R | rs375067750 | -0.1 | 0.005 | N | 0.323 | 0.243 | 0.427254322456 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
W/R | rs375067750 | -0.1 | 0.005 | N | 0.323 | 0.243 | 0.427254322456 | gnomAD-4.0.0 | 1.30137E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.78001E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
W/A | 0.1382 | likely_benign | 0.1433 | benign | -1.606 | Destabilizing | 0.304 | N | 0.339 | neutral | None | None | None | None | N |
W/C | 0.3565 | ambiguous | 0.4178 | ambiguous | -0.282 | Destabilizing | 0.992 | D | 0.293 | neutral | N | 0.492538286 | None | None | N |
W/D | 0.3204 | likely_benign | 0.325 | benign | 0.637 | Stabilizing | 0.679 | D | 0.379 | neutral | None | None | None | None | N |
W/E | 0.2441 | likely_benign | 0.2742 | benign | 0.69 | Stabilizing | 0.466 | N | 0.377 | neutral | None | None | None | None | N |
W/F | 0.1267 | likely_benign | 0.1236 | benign | -0.857 | Destabilizing | 0.932 | D | 0.368 | neutral | None | None | None | None | N |
W/G | 0.1147 | likely_benign | 0.1156 | benign | -1.792 | Destabilizing | 0.248 | N | 0.388 | neutral | N | 0.492018211 | None | None | N |
W/H | 0.178 | likely_benign | 0.1815 | benign | -0.321 | Destabilizing | 0.979 | D | 0.304 | neutral | None | None | None | None | N |
W/I | 0.1827 | likely_benign | 0.1958 | benign | -1.024 | Destabilizing | 0.938 | D | 0.335 | neutral | None | None | None | None | N |
W/K | 0.1793 | likely_benign | 0.1978 | benign | -0.288 | Destabilizing | 0.012 | N | 0.295 | neutral | None | None | None | None | N |
W/L | 0.117 | likely_benign | 0.1272 | benign | -1.024 | Destabilizing | 0.397 | N | 0.379 | neutral | N | 0.457385563 | None | None | N |
W/M | 0.2185 | likely_benign | 0.2291 | benign | -0.677 | Destabilizing | 0.979 | D | 0.325 | neutral | None | None | None | None | N |
W/N | 0.2745 | likely_benign | 0.2609 | benign | -0.509 | Destabilizing | 0.679 | D | 0.381 | neutral | None | None | None | None | N |
W/P | 0.8375 | likely_pathogenic | 0.8839 | pathogenic | -1.217 | Destabilizing | 0.938 | D | 0.363 | neutral | None | None | None | None | N |
W/Q | 0.1753 | likely_benign | 0.2036 | benign | -0.427 | Destabilizing | 0.679 | D | 0.407 | neutral | None | None | None | None | N |
W/R | 0.1403 | likely_benign | 0.1619 | benign | 0.034 | Stabilizing | 0.005 | N | 0.323 | neutral | N | 0.384791959 | None | None | N |
W/S | 0.1025 | likely_benign | 0.0984 | benign | -1.075 | Destabilizing | 0.009 | N | 0.297 | neutral | N | 0.40543659 | None | None | N |
W/T | 0.1212 | likely_benign | 0.12 | benign | -0.977 | Destabilizing | 0.304 | N | 0.383 | neutral | None | None | None | None | N |
W/V | 0.1587 | likely_benign | 0.1641 | benign | -1.217 | Destabilizing | 0.679 | D | 0.377 | neutral | None | None | None | None | N |
W/Y | 0.2064 | likely_benign | 0.2145 | benign | -0.878 | Destabilizing | 0.797 | D | 0.349 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.