Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8791 | 26596;26597;26598 | chr2:178714403;178714402;178714401 | chr2:179579130;179579129;179579128 |
N2AB | 8474 | 25645;25646;25647 | chr2:178714403;178714402;178714401 | chr2:179579130;179579129;179579128 |
N2A | 7547 | 22864;22865;22866 | chr2:178714403;178714402;178714401 | chr2:179579130;179579129;179579128 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | None | None | 0.02 | N | 0.445 | 0.187 | 0.331365685468 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.0969 | likely_benign | 0.1287 | benign | -1.844 | Destabilizing | 0.006 | N | 0.335 | neutral | None | None | None | None | N |
I/C | 0.4301 | ambiguous | 0.5116 | ambiguous | -1.307 | Destabilizing | 0.326 | N | 0.495 | neutral | None | None | None | None | N |
I/D | 0.2886 | likely_benign | 0.346 | ambiguous | -1.53 | Destabilizing | 0.014 | N | 0.5 | neutral | None | None | None | None | N |
I/E | 0.21 | likely_benign | 0.2327 | benign | -1.512 | Destabilizing | None | N | 0.331 | neutral | None | None | None | None | N |
I/F | 0.0973 | likely_benign | 0.1275 | benign | -1.421 | Destabilizing | 0.02 | N | 0.445 | neutral | N | 0.492342282 | None | None | N |
I/G | 0.2908 | likely_benign | 0.3753 | ambiguous | -2.178 | Highly Destabilizing | 0.027 | N | 0.501 | neutral | None | None | None | None | N |
I/H | 0.2005 | likely_benign | 0.235 | benign | -1.399 | Destabilizing | 0.167 | N | 0.583 | neutral | None | None | None | None | N |
I/K | 0.1141 | likely_benign | 0.1298 | benign | -1.103 | Destabilizing | None | N | 0.329 | neutral | None | None | None | None | N |
I/L | 0.0896 | likely_benign | 0.1103 | benign | -0.983 | Destabilizing | None | N | 0.307 | neutral | N | 0.479206417 | None | None | N |
I/M | 0.0713 | likely_benign | 0.0826 | benign | -0.825 | Destabilizing | 0.021 | N | 0.43 | neutral | D | 0.532155467 | None | None | N |
I/N | 0.1039 | likely_benign | 0.1099 | benign | -0.979 | Destabilizing | None | N | 0.343 | neutral | N | 0.49827218 | None | None | N |
I/P | 0.6631 | likely_pathogenic | 0.7944 | pathogenic | -1.241 | Destabilizing | 0.121 | N | 0.587 | neutral | None | None | None | None | N |
I/Q | 0.1642 | likely_benign | 0.1957 | benign | -1.193 | Destabilizing | 0.001 | N | 0.36 | neutral | None | None | None | None | N |
I/R | 0.0834 | likely_benign | 0.0998 | benign | -0.55 | Destabilizing | 0.006 | N | 0.52 | neutral | None | None | None | None | N |
I/S | 0.0991 | likely_benign | 0.1116 | benign | -1.635 | Destabilizing | 0.005 | N | 0.44 | neutral | N | 0.507353023 | None | None | N |
I/T | 0.0551 | likely_benign | 0.0656 | benign | -1.501 | Destabilizing | None | N | 0.161 | neutral | N | 0.440109311 | None | None | N |
I/V | 0.0603 | likely_benign | 0.0718 | benign | -1.241 | Destabilizing | None | N | 0.095 | neutral | N | 0.42452657 | None | None | N |
I/W | 0.4889 | ambiguous | 0.6257 | pathogenic | -1.489 | Destabilizing | 0.892 | D | 0.577 | neutral | None | None | None | None | N |
I/Y | 0.2662 | likely_benign | 0.2915 | benign | -1.236 | Destabilizing | 0.006 | N | 0.564 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.