Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8793 | 26602;26603;26604 | chr2:178714397;178714396;178714395 | chr2:179579124;179579123;179579122 |
N2AB | 8476 | 25651;25652;25653 | chr2:178714397;178714396;178714395 | chr2:179579124;179579123;179579122 |
N2A | 7549 | 22870;22871;22872 | chr2:178714397;178714396;178714395 | chr2:179579124;179579123;179579122 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs776154251 | -1.493 | 0.001 | D | 0.28 | 0.241 | 0.255270683199 | gnomAD-2.1.1 | 5.37E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 5.59642E-04 | 7.85E-06 | 0 |
T/A | rs776154251 | -1.493 | 0.001 | D | 0.28 | 0.241 | 0.255270683199 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 1.88324E-04 | 0 | 1.47E-05 | 0 | 0 |
T/A | rs776154251 | -1.493 | 0.001 | D | 0.28 | 0.241 | 0.255270683199 | gnomAD-4.0.0 | 1.54926E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 2.96856E-04 | 0 | 5.08581E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0765 | likely_benign | 0.0853 | benign | -1.048 | Destabilizing | 0.001 | N | 0.28 | neutral | D | 0.532792972 | None | None | N |
T/C | 0.3645 | ambiguous | 0.4341 | ambiguous | -0.881 | Destabilizing | 0.952 | D | 0.589 | neutral | None | None | None | None | N |
T/D | 0.4129 | ambiguous | 0.5242 | ambiguous | -1.803 | Destabilizing | 0.428 | N | 0.609 | neutral | None | None | None | None | N |
T/E | 0.2623 | likely_benign | 0.3329 | benign | -1.605 | Destabilizing | 0.416 | N | 0.584 | neutral | None | None | None | None | N |
T/F | 0.1566 | likely_benign | 0.2043 | benign | -0.678 | Destabilizing | 0.903 | D | 0.619 | neutral | None | None | None | None | N |
T/G | 0.2411 | likely_benign | 0.3109 | benign | -1.46 | Destabilizing | 0.472 | N | 0.566 | neutral | None | None | None | None | N |
T/H | 0.1894 | likely_benign | 0.2384 | benign | -1.667 | Destabilizing | 0.988 | D | 0.607 | neutral | None | None | None | None | N |
T/I | 0.1159 | likely_benign | 0.1385 | benign | 0.031 | Stabilizing | 0.115 | N | 0.533 | neutral | N | 0.492550227 | None | None | N |
T/K | 0.1526 | likely_benign | 0.1951 | benign | -0.642 | Destabilizing | 0.499 | N | 0.582 | neutral | None | None | None | None | N |
T/L | 0.0789 | likely_benign | 0.0967 | benign | 0.031 | Stabilizing | 0.003 | N | 0.449 | neutral | None | None | None | None | N |
T/M | 0.0842 | likely_benign | 0.0956 | benign | -0.03 | Destabilizing | 0.777 | D | 0.611 | neutral | None | None | None | None | N |
T/N | 0.1301 | likely_benign | 0.1641 | benign | -1.371 | Destabilizing | 0.361 | N | 0.589 | neutral | N | 0.507096083 | None | None | N |
T/P | 0.6117 | likely_pathogenic | 0.756 | pathogenic | -0.297 | Destabilizing | 0.534 | D | 0.599 | neutral | D | 0.530569162 | None | None | N |
T/Q | 0.1749 | likely_benign | 0.2149 | benign | -1.127 | Destabilizing | 0.768 | D | 0.608 | neutral | None | None | None | None | N |
T/R | 0.1189 | likely_benign | 0.148 | benign | -0.873 | Destabilizing | 0.903 | D | 0.607 | neutral | None | None | None | None | N |
T/S | 0.0975 | likely_benign | 0.1143 | benign | -1.497 | Destabilizing | 0.001 | N | 0.433 | neutral | N | 0.482940155 | None | None | N |
T/V | 0.1004 | likely_benign | 0.112 | benign | -0.297 | Destabilizing | 0.002 | N | 0.43 | neutral | None | None | None | None | N |
T/W | 0.4812 | ambiguous | 0.5782 | pathogenic | -0.926 | Destabilizing | 0.995 | D | 0.659 | neutral | None | None | None | None | N |
T/Y | 0.2081 | likely_benign | 0.2548 | benign | -0.519 | Destabilizing | 0.95 | D | 0.624 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.