Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8795 | 26608;26609;26610 | chr2:178714391;178714390;178714389 | chr2:179579118;179579117;179579116 |
N2AB | 8478 | 25657;25658;25659 | chr2:178714391;178714390;178714389 | chr2:179579118;179579117;179579116 |
N2A | 7551 | 22876;22877;22878 | chr2:178714391;178714390;178714389 | chr2:179579118;179579117;179579116 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | None | None | 0.071 | N | 0.349 | 0.121 | 0.276482976112 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
Q/R | None | None | 0.046 | N | 0.433 | 0.123 | 0.171388866994 | gnomAD-4.0.0 | 1.59134E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85847E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2122 | likely_benign | 0.2398 | benign | -0.965 | Destabilizing | 0.328 | N | 0.451 | neutral | None | None | None | None | N |
Q/C | 0.4038 | ambiguous | 0.4803 | ambiguous | -0.52 | Destabilizing | 0.967 | D | 0.505 | neutral | None | None | None | None | N |
Q/D | 0.3801 | ambiguous | 0.4299 | ambiguous | -1.698 | Destabilizing | 0.262 | N | 0.395 | neutral | None | None | None | None | N |
Q/E | 0.0952 | likely_benign | 0.1007 | benign | -1.433 | Destabilizing | 0.071 | N | 0.349 | neutral | N | 0.504427361 | None | None | N |
Q/F | 0.4376 | ambiguous | 0.4873 | ambiguous | -0.387 | Destabilizing | 0.824 | D | 0.528 | neutral | None | None | None | None | N |
Q/G | 0.247 | likely_benign | 0.2895 | benign | -1.43 | Destabilizing | 0.542 | D | 0.525 | neutral | None | None | None | None | N |
Q/H | 0.1236 | likely_benign | 0.1368 | benign | -1.093 | Destabilizing | 0.001 | N | 0.314 | neutral | N | 0.506891663 | None | None | N |
Q/I | 0.2641 | likely_benign | 0.2974 | benign | 0.297 | Stabilizing | 0.006 | N | 0.461 | neutral | None | None | None | None | N |
Q/K | 0.0937 | likely_benign | 0.1008 | benign | -0.471 | Destabilizing | None | N | 0.239 | neutral | N | 0.457809637 | None | None | N |
Q/L | 0.1102 | likely_benign | 0.1216 | benign | 0.297 | Stabilizing | 0.068 | N | 0.464 | neutral | N | 0.516895226 | None | None | N |
Q/M | 0.3235 | likely_benign | 0.3516 | ambiguous | 0.525 | Stabilizing | 0.77 | D | 0.449 | neutral | None | None | None | None | N |
Q/N | 0.2423 | likely_benign | 0.2677 | benign | -1.359 | Destabilizing | 0.151 | N | 0.389 | neutral | None | None | None | None | N |
Q/P | 0.6067 | likely_pathogenic | 0.6729 | pathogenic | -0.095 | Destabilizing | 0.352 | N | 0.512 | neutral | N | 0.516812412 | None | None | N |
Q/R | 0.0791 | likely_benign | 0.0863 | benign | -0.656 | Destabilizing | 0.046 | N | 0.433 | neutral | N | 0.483281298 | None | None | N |
Q/S | 0.2102 | likely_benign | 0.2305 | benign | -1.57 | Destabilizing | 0.328 | N | 0.407 | neutral | None | None | None | None | N |
Q/T | 0.1635 | likely_benign | 0.1872 | benign | -1.098 | Destabilizing | 0.044 | N | 0.493 | neutral | None | None | None | None | N |
Q/V | 0.201 | likely_benign | 0.2235 | benign | -0.095 | Destabilizing | 0.028 | N | 0.477 | neutral | None | None | None | None | N |
Q/W | 0.3048 | likely_benign | 0.3606 | ambiguous | -0.398 | Destabilizing | 0.993 | D | 0.51 | neutral | None | None | None | None | N |
Q/Y | 0.2512 | likely_benign | 0.2818 | benign | -0.036 | Destabilizing | 0.536 | D | 0.553 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.