Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8796 | 26611;26612;26613 | chr2:178714388;178714387;178714386 | chr2:179579115;179579114;179579113 |
N2AB | 8479 | 25660;25661;25662 | chr2:178714388;178714387;178714386 | chr2:179579115;179579114;179579113 |
N2A | 7552 | 22879;22880;22881 | chr2:178714388;178714387;178714386 | chr2:179579115;179579114;179579113 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/C | None | None | 0.929 | N | 0.787 | 0.554 | 0.71030341735 | gnomAD-4.0.0 | 3.42113E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49748E-06 | 0 | 0 |
F/L | rs1193918191 | -0.784 | None | N | 0.3 | 0.135 | 0.213573922156 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
F/L | rs1193918191 | -0.784 | None | N | 0.3 | 0.135 | 0.213573922156 | gnomAD-4.0.0 | 1.59133E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8585E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.665 | likely_pathogenic | 0.7094 | pathogenic | -3.292 | Highly Destabilizing | 0.067 | N | 0.619 | neutral | None | None | None | None | N |
F/C | 0.2614 | likely_benign | 0.3395 | benign | -2.459 | Highly Destabilizing | 0.929 | D | 0.787 | deleterious | N | 0.503747813 | None | None | N |
F/D | 0.9259 | likely_pathogenic | 0.9355 | pathogenic | -3.971 | Highly Destabilizing | 0.993 | D | 0.777 | deleterious | None | None | None | None | N |
F/E | 0.9223 | likely_pathogenic | 0.9304 | pathogenic | -3.742 | Highly Destabilizing | 0.937 | D | 0.75 | deleterious | None | None | None | None | N |
F/G | 0.8364 | likely_pathogenic | 0.8569 | pathogenic | -3.766 | Highly Destabilizing | 0.98 | D | 0.734 | prob.delet. | None | None | None | None | N |
F/H | 0.7746 | likely_pathogenic | 0.7817 | pathogenic | -2.424 | Highly Destabilizing | 0.838 | D | 0.737 | prob.delet. | None | None | None | None | N |
F/I | 0.0893 | likely_benign | 0.0924 | benign | -1.723 | Destabilizing | None | N | 0.297 | neutral | N | 0.351758741 | None | None | N |
F/K | 0.9246 | likely_pathogenic | 0.9268 | pathogenic | -2.661 | Highly Destabilizing | 0.954 | D | 0.747 | deleterious | None | None | None | None | N |
F/L | 0.4696 | ambiguous | 0.4433 | ambiguous | -1.723 | Destabilizing | None | N | 0.3 | neutral | N | 0.41290128 | None | None | N |
F/M | 0.2996 | likely_benign | 0.2909 | benign | -1.571 | Destabilizing | 0.098 | N | 0.609 | neutral | None | None | None | None | N |
F/N | 0.799 | likely_pathogenic | 0.8233 | pathogenic | -3.249 | Highly Destabilizing | 0.998 | D | 0.805 | deleterious | None | None | None | None | N |
F/P | 0.9762 | likely_pathogenic | 0.9761 | pathogenic | -2.263 | Highly Destabilizing | 0.998 | D | 0.809 | deleterious | None | None | None | None | N |
F/Q | 0.8766 | likely_pathogenic | 0.8753 | pathogenic | -3.162 | Highly Destabilizing | 0.994 | D | 0.817 | deleterious | None | None | None | None | N |
F/R | 0.8762 | likely_pathogenic | 0.878 | pathogenic | -2.156 | Highly Destabilizing | 0.986 | D | 0.807 | deleterious | None | None | None | None | N |
F/S | 0.6649 | likely_pathogenic | 0.7361 | pathogenic | -3.849 | Highly Destabilizing | 0.974 | D | 0.695 | prob.neutral | N | 0.503494323 | None | None | N |
F/T | 0.6959 | likely_pathogenic | 0.7395 | pathogenic | -3.497 | Highly Destabilizing | 0.91 | D | 0.679 | prob.neutral | None | None | None | None | N |
F/V | 0.1347 | likely_benign | 0.1529 | benign | -2.263 | Highly Destabilizing | None | N | 0.435 | neutral | N | 0.441973393 | None | None | N |
F/W | 0.506 | ambiguous | 0.5063 | ambiguous | -0.749 | Destabilizing | 0.973 | D | 0.584 | neutral | None | None | None | None | N |
F/Y | 0.2094 | likely_benign | 0.2345 | benign | -1.229 | Destabilizing | 0.184 | N | 0.504 | neutral | N | 0.503747813 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.