Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8799 | 26620;26621;26622 | chr2:178714379;178714378;178714377 | chr2:179579106;179579105;179579104 |
N2AB | 8482 | 25669;25670;25671 | chr2:178714379;178714378;178714377 | chr2:179579106;179579105;179579104 |
N2A | 7555 | 22888;22889;22890 | chr2:178714379;178714378;178714377 | chr2:179579106;179579105;179579104 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1560601919 | None | 0.295 | N | 0.537 | 0.214 | 0.389283895039 | gnomAD-4.0.0 | 6.15807E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09545E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.062 | likely_benign | 0.0671 | benign | -2.409 | Highly Destabilizing | None | N | 0.121 | neutral | N | 0.440208098 | None | None | N |
V/C | 0.6192 | likely_pathogenic | 0.6916 | pathogenic | -2.331 | Highly Destabilizing | 0.356 | N | 0.579 | neutral | None | None | None | None | N |
V/D | 0.555 | ambiguous | 0.6092 | pathogenic | -3.092 | Highly Destabilizing | 0.072 | N | 0.593 | neutral | None | None | None | None | N |
V/E | 0.5376 | ambiguous | 0.5751 | pathogenic | -2.872 | Highly Destabilizing | 0.024 | N | 0.509 | neutral | D | 0.535016615 | None | None | N |
V/F | 0.3416 | ambiguous | 0.4145 | ambiguous | -1.39 | Destabilizing | 0.356 | N | 0.637 | neutral | None | None | None | None | N |
V/G | 0.1412 | likely_benign | 0.1706 | benign | -2.905 | Highly Destabilizing | 0.012 | N | 0.467 | neutral | D | 0.535016615 | None | None | N |
V/H | 0.8074 | likely_pathogenic | 0.8559 | pathogenic | -2.408 | Highly Destabilizing | 0.628 | D | 0.604 | neutral | None | None | None | None | N |
V/I | 0.092 | likely_benign | 0.0989 | benign | -1.012 | Destabilizing | 0.016 | N | 0.424 | neutral | None | None | None | None | N |
V/K | 0.7033 | likely_pathogenic | 0.7502 | pathogenic | -1.863 | Destabilizing | 0.072 | N | 0.513 | neutral | None | None | None | None | N |
V/L | 0.1775 | likely_benign | 0.2164 | benign | -1.012 | Destabilizing | 0.005 | N | 0.319 | neutral | D | 0.522962768 | None | None | N |
V/M | 0.1693 | likely_benign | 0.2015 | benign | -1.441 | Destabilizing | 0.295 | N | 0.537 | neutral | N | 0.511632441 | None | None | N |
V/N | 0.3986 | ambiguous | 0.4422 | ambiguous | -2.263 | Highly Destabilizing | 0.072 | N | 0.607 | neutral | None | None | None | None | N |
V/P | 0.3177 | likely_benign | 0.3087 | benign | -1.456 | Destabilizing | 0.072 | N | 0.581 | neutral | None | None | None | None | N |
V/Q | 0.6092 | likely_pathogenic | 0.6588 | pathogenic | -2.123 | Highly Destabilizing | 0.356 | N | 0.639 | neutral | None | None | None | None | N |
V/R | 0.6389 | likely_pathogenic | 0.687 | pathogenic | -1.685 | Destabilizing | 0.072 | N | 0.645 | neutral | None | None | None | None | N |
V/S | 0.1374 | likely_benign | 0.1603 | benign | -2.86 | Highly Destabilizing | None | N | 0.354 | neutral | None | None | None | None | N |
V/T | 0.1066 | likely_benign | 0.1025 | benign | -2.504 | Highly Destabilizing | None | N | 0.131 | neutral | None | None | None | None | N |
V/W | 0.8799 | likely_pathogenic | 0.9265 | pathogenic | -1.763 | Destabilizing | 0.864 | D | 0.577 | neutral | None | None | None | None | N |
V/Y | 0.7419 | likely_pathogenic | 0.8115 | pathogenic | -1.498 | Destabilizing | 0.356 | N | 0.625 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.