Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8804 | 26635;26636;26637 | chr2:178714364;178714363;178714362 | chr2:179579091;179579090;179579089 |
N2AB | 8487 | 25684;25685;25686 | chr2:178714364;178714363;178714362 | chr2:179579091;179579090;179579089 |
N2A | 7560 | 22903;22904;22905 | chr2:178714364;178714363;178714362 | chr2:179579091;179579090;179579089 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/P | rs778012263 | None | 0.384 | D | 0.684 | 0.333 | 0.339074221408 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/P | rs778012263 | None | 0.384 | D | 0.684 | 0.333 | 0.339074221408 | gnomAD-4.0.0 | 1.85913E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.5429E-06 | 0 | 0 |
A/S | rs778012263 | -0.952 | None | N | 0.348 | 0.05 | 0.18274738541 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4689 | ambiguous | 0.4945 | ambiguous | -0.823 | Destabilizing | 0.863 | D | 0.559 | neutral | None | None | None | None | N |
A/D | 0.2583 | likely_benign | 0.3119 | benign | -0.469 | Destabilizing | 0.238 | N | 0.664 | neutral | D | 0.535483774 | None | None | N |
A/E | 0.2064 | likely_benign | 0.2321 | benign | -0.567 | Destabilizing | 0.366 | N | 0.629 | neutral | None | None | None | None | N |
A/F | 0.2865 | likely_benign | 0.3394 | benign | -0.985 | Destabilizing | 0.862 | D | 0.759 | deleterious | None | None | None | None | N |
A/G | 0.1149 | likely_benign | 0.1266 | benign | -0.786 | Destabilizing | 0.009 | N | 0.434 | neutral | N | 0.51724473 | None | None | N |
A/H | 0.4199 | ambiguous | 0.4527 | ambiguous | -0.864 | Destabilizing | 0.959 | D | 0.733 | prob.delet. | None | None | None | None | N |
A/I | 0.1869 | likely_benign | 0.2404 | benign | -0.361 | Destabilizing | 0.607 | D | 0.685 | prob.neutral | None | None | None | None | N |
A/K | 0.3275 | likely_benign | 0.3796 | ambiguous | -0.841 | Destabilizing | 0.607 | D | 0.632 | neutral | None | None | None | None | N |
A/L | 0.1622 | likely_benign | 0.1919 | benign | -0.361 | Destabilizing | 0.306 | N | 0.545 | neutral | None | None | None | None | N |
A/M | 0.1671 | likely_benign | 0.2004 | benign | -0.32 | Destabilizing | 0.959 | D | 0.667 | neutral | None | None | None | None | N |
A/N | 0.2313 | likely_benign | 0.2693 | benign | -0.514 | Destabilizing | 0.046 | N | 0.723 | prob.delet. | None | None | None | None | N |
A/P | 0.5233 | ambiguous | 0.6362 | pathogenic | -0.409 | Destabilizing | 0.384 | N | 0.684 | prob.neutral | D | 0.528741829 | None | None | N |
A/Q | 0.2869 | likely_benign | 0.3063 | benign | -0.733 | Destabilizing | 0.755 | D | 0.697 | prob.neutral | None | None | None | None | N |
A/R | 0.2794 | likely_benign | 0.3186 | benign | -0.462 | Destabilizing | 0.755 | D | 0.693 | prob.neutral | None | None | None | None | N |
A/S | 0.0896 | likely_benign | 0.0889 | benign | -0.858 | Destabilizing | None | N | 0.348 | neutral | N | 0.461137944 | None | None | N |
A/T | 0.0768 | likely_benign | 0.0861 | benign | -0.86 | Destabilizing | None | N | 0.242 | neutral | D | 0.525978856 | None | None | N |
A/V | 0.1119 | likely_benign | 0.1361 | benign | -0.409 | Destabilizing | 0.111 | N | 0.451 | neutral | N | 0.516371566 | None | None | N |
A/W | 0.6898 | likely_pathogenic | 0.7306 | pathogenic | -1.197 | Destabilizing | 0.986 | D | 0.713 | prob.delet. | None | None | None | None | N |
A/Y | 0.4072 | ambiguous | 0.4453 | ambiguous | -0.815 | Destabilizing | 0.862 | D | 0.754 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.