Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8808 | 26647;26648;26649 | chr2:178714352;178714351;178714350 | chr2:179579079;179579078;179579077 |
N2AB | 8491 | 25696;25697;25698 | chr2:178714352;178714351;178714350 | chr2:179579079;179579078;179579077 |
N2A | 7564 | 22915;22916;22917 | chr2:178714352;178714351;178714350 | chr2:179579079;179579078;179579077 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.089 | N | 0.663 | 0.278 | 0.322230723748 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0851 | likely_benign | 0.0951 | benign | -1.263 | Destabilizing | 0.089 | N | 0.663 | neutral | N | 0.510199598 | None | None | N |
T/C | 0.362 | ambiguous | 0.4469 | ambiguous | -0.636 | Destabilizing | 0.998 | D | 0.739 | prob.delet. | None | None | None | None | N |
T/D | 0.5499 | ambiguous | 0.6905 | pathogenic | -1.782 | Destabilizing | 0.872 | D | 0.767 | deleterious | None | None | None | None | N |
T/E | 0.4375 | ambiguous | 0.5562 | ambiguous | -1.501 | Destabilizing | 0.958 | D | 0.767 | deleterious | None | None | None | None | N |
T/F | 0.168 | likely_benign | 0.2337 | benign | -0.75 | Destabilizing | 0.988 | D | 0.805 | deleterious | None | None | None | None | N |
T/G | 0.2936 | likely_benign | 0.3627 | ambiguous | -1.702 | Destabilizing | 0.942 | D | 0.735 | prob.delet. | None | None | None | None | N |
T/H | 0.222 | likely_benign | 0.2849 | benign | -1.575 | Destabilizing | 0.999 | D | 0.784 | deleterious | None | None | None | None | N |
T/I | 0.0818 | likely_benign | 0.0925 | benign | -0.066 | Destabilizing | 0.021 | N | 0.504 | neutral | N | 0.45883612 | None | None | N |
T/K | 0.2256 | likely_benign | 0.2953 | benign | -0.137 | Destabilizing | 0.969 | D | 0.767 | deleterious | None | None | None | None | N |
T/L | 0.0809 | likely_benign | 0.0959 | benign | -0.066 | Destabilizing | 0.392 | N | 0.695 | prob.neutral | None | None | None | None | N |
T/M | 0.0844 | likely_benign | 0.0967 | benign | -0.338 | Destabilizing | 0.969 | D | 0.77 | deleterious | None | None | None | None | N |
T/N | 0.1501 | likely_benign | 0.1967 | benign | -1.056 | Destabilizing | 0.837 | D | 0.728 | prob.delet. | N | 0.511213556 | None | None | N |
T/P | 0.5581 | ambiguous | 0.6963 | pathogenic | -0.439 | Destabilizing | 0.913 | D | 0.786 | deleterious | D | 0.522823351 | None | None | N |
T/Q | 0.2572 | likely_benign | 0.3283 | benign | -0.65 | Destabilizing | 0.968 | D | 0.786 | deleterious | None | None | None | None | N |
T/R | 0.1512 | likely_benign | 0.1942 | benign | -0.592 | Destabilizing | 0.994 | D | 0.783 | deleterious | None | None | None | None | N |
T/S | 0.1147 | likely_benign | 0.1349 | benign | -1.257 | Destabilizing | 0.018 | N | 0.505 | neutral | N | 0.510621749 | None | None | N |
T/V | 0.0867 | likely_benign | 0.0988 | benign | -0.439 | Destabilizing | 0.315 | N | 0.662 | neutral | None | None | None | None | N |
T/W | 0.5175 | ambiguous | 0.6447 | pathogenic | -0.992 | Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
T/Y | 0.2185 | likely_benign | 0.2881 | benign | -0.574 | Destabilizing | 0.994 | D | 0.816 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.