Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8841 | 26746;26747;26748 | chr2:178714137;178714136;178714135 | chr2:179578864;179578863;179578862 |
N2AB | 8524 | 25795;25796;25797 | chr2:178714137;178714136;178714135 | chr2:179578864;179578863;179578862 |
N2A | 7597 | 23014;23015;23016 | chr2:178714137;178714136;178714135 | chr2:179578864;179578863;179578862 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs2154297041 | None | 0.962 | N | 0.455 | 0.369 | 0.602294275845 | gnomAD-4.0.0 | 1.59262E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86007E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2758 | likely_benign | 0.2958 | benign | -1.614 | Destabilizing | 0.992 | D | 0.447 | neutral | N | 0.506857165 | None | None | N |
V/C | 0.8523 | likely_pathogenic | 0.8535 | pathogenic | -1.359 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
V/D | 0.8425 | likely_pathogenic | 0.8454 | pathogenic | -1.25 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | D | 0.537245114 | None | None | N |
V/E | 0.7701 | likely_pathogenic | 0.7526 | pathogenic | -1.234 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
V/F | 0.3524 | ambiguous | 0.3581 | ambiguous | -1.344 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | D | 0.52990128 | None | None | N |
V/G | 0.3286 | likely_benign | 0.3406 | ambiguous | -1.944 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | D | 0.527521424 | None | None | N |
V/H | 0.9059 | likely_pathogenic | 0.9138 | pathogenic | -1.443 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | N |
V/I | 0.1114 | likely_benign | 0.1235 | benign | -0.803 | Destabilizing | 0.619 | D | 0.313 | neutral | D | 0.526771077 | None | None | N |
V/K | 0.8017 | likely_pathogenic | 0.7576 | pathogenic | -1.163 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
V/L | 0.385 | ambiguous | 0.4229 | ambiguous | -0.803 | Destabilizing | 0.962 | D | 0.455 | neutral | N | 0.497412072 | None | None | N |
V/M | 0.27 | likely_benign | 0.2966 | benign | -0.749 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
V/N | 0.713 | likely_pathogenic | 0.7333 | pathogenic | -1.024 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
V/P | 0.9419 | likely_pathogenic | 0.9471 | pathogenic | -1.039 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
V/Q | 0.7691 | likely_pathogenic | 0.7498 | pathogenic | -1.187 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
V/R | 0.7636 | likely_pathogenic | 0.7187 | pathogenic | -0.715 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/S | 0.4912 | ambiguous | 0.5366 | ambiguous | -1.645 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
V/T | 0.3503 | ambiguous | 0.3899 | ambiguous | -1.508 | Destabilizing | 0.997 | D | 0.682 | prob.neutral | None | None | None | None | N |
V/W | 0.948 | likely_pathogenic | 0.9598 | pathogenic | -1.485 | Destabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
V/Y | 0.8021 | likely_pathogenic | 0.7954 | pathogenic | -1.174 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.